| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1105 |
|---|
| Symbol | |
|---|
| ID | 3673176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1163588 |
|---|
| End bp | 1163986 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637709788 |
|---|
| Product | methionine sulfoxide reductase B |
|---|
| Protein accession | YP_314863 |
|---|
| Protein GI | 74317123 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00407533 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.774201 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTG ACGAACCCAA AACCGACGCG CAGTGGCGCG CCGAACTGTC GCCGGAGCAG
TACCGCATCC TGCGCGAACA GGGCACCGAG CGGGCGTTTA CCGGGGAGTA CTGGGATCAC
CACGCGAACG GCGAATACCG CTGCGCGGCT TGTGGCGCGC CGCTCTTCTC GTCGTCGGCG
AAGTTCGACT CGGGCACCGG CTGGCCAAGC TTTTACGAGG CCCTGAACGC GCAGGCCGTG
CGCGAGCGCA CCGACACCAC CCACGGCATG GTCCGCACCG AAGCGCTGTG CAGCCGCTGC
AACTCGCACC TCGGCCACGT CTTCCCCGAC GGGCCGCCGC CCACCGGTCT GCGCTACTGC
ATCAATTCGG CGTCGCTCAG TTTTCACCCG AAGGACTGA
|
|---|
| Protein sequence | MSTDEPKTDA QWRAELSPEQ YRILREQGTE RAFTGEYWDH HANGEYRCAA CGAPLFSSSA
KFDSGTGWPS FYEALNAQAV RERTDTTHGM VRTEALCSRC NSHLGHVFPD GPPPTGLRYC
INSASLSFHP KD
|
|---|
| |