| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1101 |
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| Symbol | |
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| ID | 3673172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1160123 |
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| End bp | 1161505 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709784 |
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| Product | DEAD/DEAH box helicase |
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| Protein accession | YP_314859 |
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| Protein GI | 74317119 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.173172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.740894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGACTT TTGCTGAACT CGGGCTTGCG CCCGACATCC TGCGCGCCCT CGACGAAATG
GGCTACGTCT CGCCGACGCC GATCCAGGCG CAGGTGATTC CGCGTGCGCT GCAGGGCGGC
GACATTCTCG GCGCGGCGCA GACCGGGACC GGCAAGACCG CGGCTTTCGC GCTGCCGCTG
ATCCAGCGCC TGCTGCCCTT CGCCAACACC AGCACCTCGC CGGCCAAGCA TCCGATCCGT
GCGCTCATCC TCACGCCGAC GCGCGAACTC GCGATCCAGG TCGAGGAGGC GATCCAGGCC
TACACCAAAC ACGTTCCGCT GCGCTCGCTG GTCGTCTACG GCGGCGTCAA CATCAACACC
CAGATACCGA TCCTCAAGAC CGGCGTCGAA ATCCTGGTCG CGACGCCGGG GCGGCTGCTC
GATCATGTGC AGAACAAGAC GCTGATGCTG ACCCAGGTCA ACACACTCGT GCTCGACGAA
GCCGACCGCA TGCTCGACAT GGGCTTCATG CCGGATCTCC GGCGCATCGT CGCCTTGCTG
CCGGCGCAGC GCGTGAACAT GATGTTCTCG GCGACCTTTC CGGAAGAAAT TCGCAAGCTC
GCCGACAGCA TCCTCAGCAC GCCGACCTTC ATCGAGGTGG CGCGCAACGA GACGGCCGTC
ACGGTCACCC AAGTCGTGCA TCCGGTGCAT CACGAGCGCA AGCGGCAATT GCTCGCGCAC
CTGATCAAGA GCCGCGACCT GCGCCAGGTG CTCGTCTTCA CGGGGACCAA GCTCGGCTGC
AACCGGCTGG CCAACGAACT CAACAAGGCC GGCATTCATG CCGACGCGAT CCACGGCGAC
AAGACCCAGC AGGAGCGTAT CAAGGCGCTC GACGCCTTCA AGGCCGGCAC GATCCGTGTG
CTCGTCGCGA CCGACGTCGC GGCGCGCGGA ATCGACATCG AGGCGCTGCC TTTCGTCGTC
AACTACGACC TGCCGCACAA CGCCGAGGAT TACGTCCATC GCATCGGCCG GACCGGGCGC
GCGGGCGCCA AGGGCGAGGC GATCTCGCTC GTCAGCGAAG CCGAGACGCG CTACCTCAAG
GACATCGAAA GACTGATCGG CACGCCGCTC GAGCCCGTGA TCGTTCCCGG CTTCGAGCCC
GGCGCGGCCG ACGTGCCGGC GTTCGAGTCG CGCCCGGCGC GCGCCCCGCG CAGCAGCGAC
CGGGGACGTG AACGGGCGCC CGCCAAACCC CAGCCGAGCC GCGACGCGCT GTTCGACGCA
CCCTATGTGC CGCGCGAGCC CGGGCAGGGC GACGCTGCCC ACGCTCCGGC GCGGCCGGCG
CCGACAAAGC AGGTGGCGGC CCTCTTTCGC AGCCCGGTCA AGCGGAACGT CCCGGACCAG
TGA
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| Protein sequence | MTTFAELGLA PDILRALDEM GYVSPTPIQA QVIPRALQGG DILGAAQTGT GKTAAFALPL
IQRLLPFANT STSPAKHPIR ALILTPTREL AIQVEEAIQA YTKHVPLRSL VVYGGVNINT
QIPILKTGVE ILVATPGRLL DHVQNKTLML TQVNTLVLDE ADRMLDMGFM PDLRRIVALL
PAQRVNMMFS ATFPEEIRKL ADSILSTPTF IEVARNETAV TVTQVVHPVH HERKRQLLAH
LIKSRDLRQV LVFTGTKLGC NRLANELNKA GIHADAIHGD KTQQERIKAL DAFKAGTIRV
LVATDVAARG IDIEALPFVV NYDLPHNAED YVHRIGRTGR AGAKGEAISL VSEAETRYLK
DIERLIGTPL EPVIVPGFEP GAADVPAFES RPARAPRSSD RGRERAPAKP QPSRDALFDA
PYVPREPGQG DAAHAPARPA PTKQVAALFR SPVKRNVPDQ
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