Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1098 |
Symbol | dapA |
ID | 3673169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1157283 |
End bp | 1158173 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637709781 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_314856 |
Protein GI | 74317116 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.429598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.674716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAA TAAGCACGGC CAGAGGAAGC CTGGTCGCGA TCGTGACCCC GATGTCGGAT GACGGCGCGC TCGATCTGGG CGCGTTGCGC CGTCTGATCG ACTGGCACAT CGAACAGGGA ACTGACGGCA TCGTCATCGT CGGCACGACC GGCGAGTCGC CGACGGTCAA CTTCGACGAG CACTGTCTGC TGATCCGCAC CGCGGTCGAA CAGGCGGGTG GACGCGTGCC GGTCATCGCA GGTACCGGTG CCAATTCGAC CAGCGAGGCG ATCGCGCTCA CCGAATGCGC GCGCGCGGCC GGTGCCCAGG CGGGCCTCTC GGTCGTGCCC TACTACAACA AGCCGACGCA GGAAGGGCTC TACCAGCACT ACCGCAAGAT CGCCGAAGCG GTCGACCTGC CGCTCATCCT TTACAACGTG CCCGGGCGGA CGGTGGCCGA TCTCGCCAAC GACACGGCGG TGCGCCTCGC GGAAGTGCCC GGCATCGTCG GCCTCAAGGA CGCGACTGGC AACATGGAAC GCGCGGCCGA TCTGGTGCGT CGGGTGCCGA AGGGTTTTGC TCTCTACAGC GGCGACGACG CGTCGGCGTT GCCGTTCATG TTGCTCGGCG GACACGGCGT GATCTCGGTC ACGGCGAACG TCGCGCCTCG GTTGATGCAC GAAATGTGCG TCGCGGCCTT CGAAGGGAAT CTCGCGCGTG CGCGCGAATG CAACGACGCG CTGTTGCCGC TGCATAGCAA GCTTTTCGTC GAAGCCAATC CGATTCCGGT CAAGTGGGCG TGCGCCGAAC TTGGCCTGAT TCCCCCGGGC CTGCGCCTGC CGCTGACGCC GCTGTCTGGC GGACAGCACG AAGTCGTGCG CGCCGCAATG CGCCACGCCG AATTGATCTA G
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Protein sequence | MAEISTARGS LVAIVTPMSD DGALDLGALR RLIDWHIEQG TDGIVIVGTT GESPTVNFDE HCLLIRTAVE QAGGRVPVIA GTGANSTSEA IALTECARAA GAQAGLSVVP YYNKPTQEGL YQHYRKIAEA VDLPLILYNV PGRTVADLAN DTAVRLAEVP GIVGLKDATG NMERAADLVR RVPKGFALYS GDDASALPFM LLGGHGVISV TANVAPRLMH EMCVAAFEGN LARARECNDA LLPLHSKLFV EANPIPVKWA CAELGLIPPG LRLPLTPLSG GQHEVVRAAM RHAELI
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