Gene Tbd_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1094 
Symbol 
ID3673165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1155057 
End bp1155395 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content69% 
IMG OID637709777 
Productflagellar protein FliO 
Protein accessionYP_314852 
Protein GI74317112 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.140384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.933798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGAC GAACGTGCGC AGCGGCGATG CTGTTCGTGC CCGCACAGGT GTGGGCGGCC 
GCCCCCGACG CGACCGGCAG CATGCTGAGT GTGTTCGTGA GCTTGGCCCT CATTCTCGGC
GGCTTCGTCG CCGTCGCATG GCTGGCCCGA CGCTACCTGC CCGGGATGGC CTCGCAGGGG
ATCGTGAAGG TGATCGGCAC GACCTCGGTC GGGCCGCGCG AGCGCGTCGT CGTCGTCGAG
ATCGACAATA CCTGGCTGAC GCTCGGCGTG GGCGGCGGCA ATGTGCGATT GCTCCACACG
CTGCCCAAGC CGGCGGCCGG CACGGAGTCT TCCCGATGA
 
Protein sequence
MARRTCAAAM LFVPAQVWAA APDATGSMLS VFVSLALILG GFVAVAWLAR RYLPGMASQG 
IVKVIGTTSV GPRERVVVVE IDNTWLTLGV GGGNVRLLHT LPKPAAGTES SR