| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1090 |
|---|
| Symbol | |
|---|
| ID | 3671193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1151927 |
|---|
| End bp | 1152532 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637709773 |
|---|
| Product | flagellar assembly protein FliH |
|---|
| Protein accession | YP_314848 |
|---|
| Protein GI | 74317108 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.486271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGG GCGACAAGCC GTCGGACGAC GCCACCGCCT TCGAGCAGTG GGAGGTCGTG
GAGGCCGCGC CGGCGAGCCC GGCGGCTCCT GCGGTCGACC CCGAAGCCGA ACTCGCGCGC
CTGCGCGAGA CCGCACACGC CGAAGGTTAC GCGGAGGGAA TGGCCGCCGG CCGCGCCGCC
GGCGAGCAGG CCTGCGGGCG TATGAAGCAG CTCGTCGAAA GCTTTTCGGC GACACTCGAC
AACCTCGATT TCCGCCTCGC CGACATGGTG CTCGACCTGG CGCTCGACGT CGCGCGCCAG
GTCGTCGCCG GCGAACTCGC GGTGCGTCCG GAGCGCATCC TCGACGTCGT CAACCTCGCG
CTCAAGCAGA TGGCCGAGAC CAGCCGGGAG GCGCGTCTGC TGCTGCATCC GGACGACGCC
GCGCTGGTGC GGCCGCATCT CGACCAGGTG CTCGACAAGA ACCGGCTGCG CATCGTCGAG
GACGTGCGCA TGGTGCGCGG CGGCTGCATG ATCGAAACCG GACAGGGCGA TCTCGACGGC
ACACTGCCGG CGCGCTGGCG CCAGGTCGTG CAGGTCCTCG GCTCCAATCA GAACTGGCTC
GAATAG
|
|---|
| Protein sequence | MSLGDKPSDD ATAFEQWEVV EAAPASPAAP AVDPEAELAR LRETAHAEGY AEGMAAGRAA
GEQACGRMKQ LVESFSATLD NLDFRLADMV LDLALDVARQ VVAGELAVRP ERILDVVNLA
LKQMAETSRE ARLLLHPDDA ALVRPHLDQV LDKNRLRIVE DVRMVRGGCM IETGQGDLDG
TLPARWRQVV QVLGSNQNWL E
|
|---|
| |