| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1088 |
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| Symbol | |
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| ID | 3672169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1149689 |
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| End bp | 1150834 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637709771 |
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| Product | flagellar biosynthesis/type III secretory pathway lipoprotein FliF |
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| Protein accession | YP_314846 |
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| Protein GI | 74317106 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.356143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGCCG GGCTGAGCTT CCTGCGCGAG CTTGTCGCGG AGGCGAGCCC GTGGCGCCGC
CTCACGCTCG CCCTGCTGAT TCTCGTGCCG CTCGGCGCGC TTGCTGCCGC CTACATCTGG
TTCAATCCCC CCGCTTATCG CGTGCTGTAC GGGCAGTTGT CCGATCGTGT CGGCGGCGAG
GTGATTGGCG CGCTCGAACA GCTCGGCATT CCCTACCGCC TCTCCGCCGG CGACGGCCGC
ATCGAAGTGC CGGTCGACAC TTTGCACGTC GCGCGCTATC GCCTTGCGGC GCTCGGGCTG
CCGCGCTCGG ACGCCGACGT CGAGGCCGAC GTCGAGCGGG CGCCGAGCTT CGGCCTGTCG
TCGTTGCAGC AACAGCAACG CCAGCAGCGC GCGCTGGAAC ACGAGCTTGC GCGCTCGATC
CAGTCGCTCG AGGCGGTCGA GCTTGCGCGC GTCCATCTCG CGCTTCCCAA GGTCTCGCCC
TTCCTGCGTG ACGCGCCGCG CGCCACCGCG GCGGTGCTGG TGCGTCTGCG CCCGCGTGCG
CAACTGTCGA CCGAGCAGGT GACGACGATC CAGACGCTGG TCGCAGCCGC GGTGCCGCGC
ATGAAGCGCG CCGACGTCCA GGTGCTCGAC CCGCGCGGCG TCGTGCTCGG CGGCGCTGCG
CCGGAAATCG AGCCCTCGCT GCGCGTGGCG CTCGAGCAGG ATCTGGCGCG GCGCGCGCTC
GCCGTGCTGA CGCCATGGCT CGGCGCGGAG CGCGTCAGCG TGCAGGTGAC GGCGACCCTC
GAGGACGCCA CCACGCGCGA GACCGTCGAG CGCATGCGCC GGGTAGCGGG CGAGGGACAG
GCCCGGCCGC TCGAAAAGAC GGTGCGTACG ACGGTCGAGC CCGAAGGCCG GATCCGCCGC
ATCGACGCAA TCGTCATCCT CGCTTTCGAC GCTGCGCCGG ACGAGATCCG CAAGGCCGAC
GAATTGGCGC GGCAGGCGTT GGGCCTGCAG CCTGCGCGCG GCGACGCCCT GAACGTCTAT
GCACTGCCGC TCGCGCGCCG CCACGGCCGG CGCCGCCGGT GGTCGAGAAG CCTGCAGCCT
CGCCGGTGTC GCTCGCGCTG GTCGCGGCCC TGGCCGGCGC GCTCGTCCTC GGCGGCTGGC
AGTTAA
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| Protein sequence | MPAGLSFLRE LVAEASPWRR LTLALLILVP LGALAAAYIW FNPPAYRVLY GQLSDRVGGE
VIGALEQLGI PYRLSAGDGR IEVPVDTLHV ARYRLAALGL PRSDADVEAD VERAPSFGLS
SLQQQQRQQR ALEHELARSI QSLEAVELAR VHLALPKVSP FLRDAPRATA AVLVRLRPRA
QLSTEQVTTI QTLVAAAVPR MKRADVQVLD PRGVVLGGAA PEIEPSLRVA LEQDLARRAL
AVLTPWLGAE RVSVQVTATL EDATTRETVE RMRRVAGEGQ ARPLEKTVRT TVEPEGRIRR
IDAIVILAFD AAPDEIRKAD ELARQALGLQ PARGDALNVY ALPLARRHGR RRRWSRSLQP
RRCRSRWSRP WPARSSSAAG S
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