| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1084 |
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| Symbol | |
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| ID | 3672165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1144110 |
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| End bp | 1145180 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637709767 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_314842 |
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| Protein GI | 74317102 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.335201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCCCC CTGCGCGCTC ATCGGCGGGC AACGCCGGAC CGCCGCGGGC AGCGGTGAAA
CGAATTACAC TCGGCTTATT TATTGCGTCC TTTCGGGCTG CCCCGATGAA CCTGCATCTC
GCTCCCCTTC GGCTCCTGTT CGTGGCATTG CTGGCCGGTT GCCAGGCGGC CGACGAGGAC
CGGTTTCAAG GCTATGTCGA AGGCGAGCCG GTCCTGGTCG CAGCGCAGCA AAGCGGCCAG
TTGACCTCAC TGCAGGTGCG ACGCGGCGAC ATGATTGCGA CGGGCGCGCC GCTTTTCAGC
CAGGATGCGG CGACCGAAGC CGCCAGCCTC GGCGAGGCCC GCGCGCAGCT GGCACAGGCG
CAGGCTCAGT TCGGCAATCT CGCGACCGGC AAGCGACCGC CCGAGATCGC GGCGATCGCC
GCCCGCGAGC GCGAGGCCGA GGCGCGGCGG GAGCTGTCCG CCGCCCACCT CGCGCGTCAG
GAGGCCCTGG TCGCGAAGGG CTTCATCAGC GCCCAAGCCC TCGACGAGGC GCGCGCGCAA
CTCGCGCGCG ACGAGGCCAG CGTCGCGCAA ACGCGGGCCG AACTCGCGAC CGCGCGCCTG
CCGGGCCGCC GCGACGAGCG CGCCGGTGCC CGCGCGGCGG TGTCGGCGAG CCAGGCCGCG
CTCGAGCAAA GCGCAATCAG GCTCGAGCAG AAATCGCAGC GCGCCCCCGT GGGCGGTTCG
GTGCAGGACG TGTTTTTCCG GGTGGGCGAA TGGGCGACGC CGGGGCAGGC GGTGGTCTCG
ATCCTGCCGC CGCAAAACAT CAAGGTCCGA TTCTTCATTC CGGAACCCCG CCTCGGCGCG
CTGCGGACCG GGCAAGGCGT CGCGATCCAC TGCGACGGCT GCGGCGCCGG GATCCCCGCC
ACGATCCGCT TCGTCAGCGC CTCCGCCGAA TACACGCCGC CCGTGCTGTA CAGCGAAAAG
AACCGCCATC GGCTCGTCTA CCTCGTCGAA GCCTGGCCGG CCGCCGGGGA CGCCGCGCGG
CTGCACCCGG GGCAGCCCGT GAGCGTCGCC CTCGACAGCG GCAAACGATG A
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| Protein sequence | MTPPARSSAG NAGPPRAAVK RITLGLFIAS FRAAPMNLHL APLRLLFVAL LAGCQAADED
RFQGYVEGEP VLVAAQQSGQ LTSLQVRRGD MIATGAPLFS QDAATEAASL GEARAQLAQA
QAQFGNLATG KRPPEIAAIA AREREAEARR ELSAAHLARQ EALVAKGFIS AQALDEARAQ
LARDEASVAQ TRAELATARL PGRRDERAGA RAAVSASQAA LEQSAIRLEQ KSQRAPVGGS
VQDVFFRVGE WATPGQAVVS ILPPQNIKVR FFIPEPRLGA LRTGQGVAIH CDGCGAGIPA
TIRFVSASAE YTPPVLYSEK NRHRLVYLVE AWPAAGDAAR LHPGQPVSVA LDSGKR
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