| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1082 |
|---|
| Symbol | |
|---|
| ID | 3673775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1142066 |
|---|
| End bp | 1143202 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637709765 |
|---|
| Product | ABC-2 type transport system permease protein |
|---|
| Protein accession | YP_314840 |
|---|
| Protein GI | 74317100 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.336575 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGTCCG CGCTGGCCTG GCACCGCCTG TGGGCGATCG TTCTGAAGGA ATTCGTGCAG
ATGCGGCGCG ACCGCATCAC CTTCGCGATG ATGGTCGGCA TCCCCGTGAT CCAGCTCGTG
CTGTTCGGGT TCGCGATCAA CACCGACCCC AAGCGGCTGC CGACCGTGGT CTTCGACGCG
AGCCAGAGCG CCTATTCGCG CAGCTTCGTC GCCAGCCTCG AAAACAGCGG CTATTTCAAC
GTGCTGGAGA CCCCCTCCAC CGTCGCCGAG GCGCGCGAGG CGCTCGCCAT CGGCGAGGTC
CAGTTCATCG TCTCGATTCC GCCTGATTTC TCCCGCCAGC TGATCCGCGG GGAAAAGCCG
GTGCTGCTGC TCGAGGCCGA CGCGTCCGAT CCCGCCGCCA CCGGCAACGC GCTCTCGGCG
CTCGCGACGA TCAACCAGAC CGCCTTGCAG CATGACCTCA AGGGCCCGCT GGCGCCGCTG
GCAGGCGGGC CCGCGCCGTT CGAAATCCGC GTTCAGCGCA ACTACAACCC CGAGGGCATC
ACGCAGTACA ACATCGTGCC GGGCCTCATG GGGACGATCC TCACGATGAC CATGATCATG
ATGACCGGCA TGGCGATGAC CCGCGAACTC GAGCGCGGCA CGATGGAAAA CCTGCTCGCC
TTCCCGGTGC ACCCGCTCGA AGTCATGATC GGCAAGATCC TGCCCTACAT CATCGTCGGC
TACATCCAGG TCGCGGTCAT CCTGATCGCC GCGCATTTCC TGTTCGGCGT GCCGATCGCC
GGCAGCCTGT CCTTGCTGCT GGCCTCGGTG CTGGTTTTTC TTGCCGCCAA TCTCACGGTC
GGCATGATGT TCTCCACGCT GGCCAAGAGC CAGTTGCAGG CGATGCAGAT GACCTTCTTC
TTCTTCCTGC CGTCGATGCT GCTGTCCGGA TTCATGTTCC CCTTCCGCGG CATGCCGCAC
TGGGCGCAGG TCATCGGCGA GGCCCTGCCG CTTACCCATT TCCTGCGGAT CGTTCGCGGC
ATCATGTTGA AGGGCAACGG CTGGGCCGAA ACCTGGCCCA ATGTCTGGCC GCTGCTGCTG
TTCATGGCGA TCGTGATGGC GATCGGCTTC AAGCGCTACC GCAAGACGCT CGACTGA
|
|---|
| Protein sequence | MRSALAWHRL WAIVLKEFVQ MRRDRITFAM MVGIPVIQLV LFGFAINTDP KRLPTVVFDA
SQSAYSRSFV ASLENSGYFN VLETPSTVAE AREALAIGEV QFIVSIPPDF SRQLIRGEKP
VLLLEADASD PAATGNALSA LATINQTALQ HDLKGPLAPL AGGPAPFEIR VQRNYNPEGI
TQYNIVPGLM GTILTMTMIM MTGMAMTREL ERGTMENLLA FPVHPLEVMI GKILPYIIVG
YIQVAVILIA AHFLFGVPIA GSLSLLLASV LVFLAANLTV GMMFSTLAKS QLQAMQMTFF
FFLPSMLLSG FMFPFRGMPH WAQVIGEALP LTHFLRIVRG IMLKGNGWAE TWPNVWPLLL
FMAIVMAIGF KRYRKTLD
|
|---|
| |