Gene Tbd_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1081 
Symbol 
ID3673774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1141065 
End bp1141994 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content68% 
IMG OID637709764 
Producthypothetical protein 
Protein accessionYP_314839 
Protein GI74317099 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.31705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCT GGCTTCATGG GCGCATGTTG AATCGCGTCA CCACCCTGCT CCGCGCGCGC 
CCCGATGCAT CGTCCTGCGC GCACACCGAA AGCCCCGCGT GGCCCGCGCA CGGCCCGGAC
GCCACGCCCG ACTCGCCGCA GTCCGCGCCC CGCCACTACC GCACGCTCTG GATTTCCGAC
ATCCACCTCG GCACGCCCGG CTGCCAGGCG CGCTACCTGC TCGACTTTCT CAAGCACAAC
GAATCCGACA CGCTCTATCT GGTCGGCGAC ATCATCGACG GCTGGCAGCT GAGGCGCGGC
TGGTACTGGC CGCGCGCGCA CAACGACGTC GTGCAGAAAC TCCTGCGCAA GGCGCGCAAG
GGCACGCGCG TGATCTTCGT GCCGGGCAAC CACGATTCGA TGGCGCGGCA GTTCATCGGT
CTCGCCTTCG GCGACATCGA GGTCGCCGAC GAGGTGATCC ACGTCACCGC CGACGGCCGC
CGCTTTCTCG TCACCCACGG GGACCGCTTC GACGGCGTGA TCCAGCACGC GCGCTGGCTC
GCCTACATCG GCGACAGCGG CTACACGCTG ATCCTCGCGC TCAACCGCTG GTTCAACGGC
CTGCGCGCGC GCATGGGCTA CCCCTACTGG TCGCTGTCGC AATACATCAA GCACAAGGTC
AAGAACGCGG TCAGCTTCAT CACCGCGTTC GAGAAGGTCA TGATCGACGA GGCGCGGCGA
CGCCGCTGCG ACGGCGTGAT CTGCGGCCAC ATCCACAAGG CCGAGATCCG CACCGTCGAC
GGCCTCGTCT ACTGCAACGA CGGCGACTGG GTCGAAAGCC TGAGCGCGCT CGCCGAAACC
GCCGACGGCA CGCTCGAAAT CCTCCACTGG ACACATTGTC TCGACGCGGC GGCGTCGCCA
CGGAGCGCCG CAGTGCGGCA GGCCGCATGA
 
Protein sequence
MSRWLHGRML NRVTTLLRAR PDASSCAHTE SPAWPAHGPD ATPDSPQSAP RHYRTLWISD 
IHLGTPGCQA RYLLDFLKHN ESDTLYLVGD IIDGWQLRRG WYWPRAHNDV VQKLLRKARK
GTRVIFVPGN HDSMARQFIG LAFGDIEVAD EVIHVTADGR RFLVTHGDRF DGVIQHARWL
AYIGDSGYTL ILALNRWFNG LRARMGYPYW SLSQYIKHKV KNAVSFITAF EKVMIDEARR
RRCDGVICGH IHKAEIRTVD GLVYCNDGDW VESLSALAET ADGTLEILHW THCLDAAASP
RSAAVRQAA