| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1061 |
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| Symbol | |
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| ID | 3673754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1123136 |
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| End bp | 1124500 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637709744 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_314819 |
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| Protein GI | 74317079 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.347929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGCG TGTTTCACGC GTTCACAAGC GCAAAAAAAA TGGCGCGCGC CGGTCGTCGA
ACGTTGCGCT TGATGGTGGC GCGACCTAGT GTGCAGGGTG CTTCCCCCAC GCACGCGACA
CGTATCACCC TCCGGACGGA ACCGAGTATG CAAACACGCG AAGACAAAAT GAGCATACTG
GACGTCGACG TCTGCGGCAC GCCCCAGCAG ATCGACGAGA TCGTTTCCGA CGCCCTGCGT
TCGGTCCGCA GCCTGCTCGG CATGCAGGTC GCGTTCGTGT CAGAGTTTCG GGACGGCGCG
CGCATCTTTC GCCACGTCGA TGCGGACGCC GACTTTTCGG TCATTCAGGT CGGTGCATGG
GACCCGCTCG ACGCGTCGTA TTGCCAGCGT GTCGTCGACG GACGCCTGCC TCCCTTGATG
CGCGACGCCT GCCAGGAGCC GGCCGCCCTG GCCCTGCCGG TGACGACCGA ATTACCGGTG
GGCGCCCATC TCAGCGTGCC GATCCGGTTC CGGGACGGCC GCGTCTACGG GACCTTCTGC
TGCTTCAGCA CCTTCGCCGA CGCGTCGCTC ACCGAGCGCG ACCTCGGGAC CTTGCGCCTG
TTCGCGGATT TCGTCGCCAA GCTGCTCGAA AGGAAGTCGA ACGAAACCAC CCGCGAAAAC
ATCATCCGCG AGCGCGTGCG CGCCGTGCTC GACGGCCGGC ATTACCGTAT CGTCTACCAG
CCCATCTTCA ACCTCGAACC GAATGCGCTC GTCGGATACG AGGCCCTGAC GCGGTTCTCG
CTAGAACCCG TCAGGACGCC CGATGCGTGG TTTTGCGAAG CGGACGAGGT CGGCCTCGAC
GAGGAGCTCG AACTGGCGGC GATTCGCGCG GCCCTGGCGG TCGTCGCGCG CCTGCCGACG
ACGGTTTATC TGTCGCTCAA TGTCTCGCCG AACACGATTC TGAAGGGCTC GCTGGCCTCG
GCCTTGAACG GCCATCCCCT CGAACGCCTG ATGCTGGAAG TGACCGAACA CGCGTCGATC
AACGACTACG AGCGGGTGGC CGCGACACTC GCGCCGCTAC GGCAGCAGGG CTTGCGACTC
GCGGTCGACG ACGCCGGCGC CGGCTTCGCG AGCTTTCGCC ACATCCTGCA GTTGAAGCCC
GACGTGATCA AACTCGACTA CAGCCTGATC CACGGCATCG ATCGCGACGG CGACCGTCGC
GCCCTCGCCG CAGCGGTCAT CCGCTTCGCC GAGGCGACCG GCAGCAAGGT CGTCGCCGAG
GGCGTCGAGA CCGAAGGCGA ATTGCAGGCG CTGCGCGAGC TCAACGTGAA CAAGGTGCAG
GGTTACTTGC TTGGGCGTCC GGCGCCCTAT CCCGGCGACG CCTAG
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| Protein sequence | MTGVFHAFTS AKKMARAGRR TLRLMVARPS VQGASPTHAT RITLRTEPSM QTREDKMSIL
DVDVCGTPQQ IDEIVSDALR SVRSLLGMQV AFVSEFRDGA RIFRHVDADA DFSVIQVGAW
DPLDASYCQR VVDGRLPPLM RDACQEPAAL ALPVTTELPV GAHLSVPIRF RDGRVYGTFC
CFSTFADASL TERDLGTLRL FADFVAKLLE RKSNETTREN IIRERVRAVL DGRHYRIVYQ
PIFNLEPNAL VGYEALTRFS LEPVRTPDAW FCEADEVGLD EELELAAIRA ALAVVARLPT
TVYLSLNVSP NTILKGSLAS ALNGHPLERL MLEVTEHASI NDYERVAATL APLRQQGLRL
AVDDAGAGFA SFRHILQLKP DVIKLDYSLI HGIDRDGDRR ALAAAVIRFA EATGSKVVAE
GVETEGELQA LRELNVNKVQ GYLLGRPAPY PGDA
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