| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1015 |
|---|
| Symbol | |
|---|
| ID | 3671240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1083582 |
|---|
| End bp | 1084166 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637709698 |
|---|
| Product | superoxide dismutase, Fe |
|---|
| Protein accession | YP_314773 |
|---|
| Protein GI | 74317033 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.011206 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACATA CCTTGCCCGC ACTGCCTTTT GCTATGGACG CGCTCGAGCC GCACATGTCG
AAGGAGACCT TCGAATACCA CTACGCCAAG CACCATCAGG CCTACGTCAC GAATCTCAAC
AACCTGATCA AGGGTGGCGA ATTCGAGAGC AAGTCCCTCG AGGACATCGT CAAGACCGCT
CCGGCCGGCG GCATCTACAA CAATGCGGCG CAAGTCTGGA ACCACACCTT CTTCTGGAAC
TGTCTGACCC CCAACGGTGG CGGTGCCCCG AGCGGCGCGC TCGCTGACGC GATCAACAAG
AAGTGGGGTT CGCTCGACGA ATTCAAGAAG GCCTTCCAGA CCAGCGCCGT CGGCAACTTC
GGCTCCGGCT GGACCTGGCT CGTCAAGAAG GCCGACGGCT CGGTCGACAT CGTCAACATG
GGCGCCGCCG GCACCCCGCT GACCACCGGC GACAAGGCCC TGTTGTGCGT CGACGTGTGG
GAGCACGCCT ACTACATCGA CTACCGCAAC CTGCGTCCCA AGTTCGTCGA GACCTTCCTC
AACAACATGG TGAACTGGAA GTTTGCCGAA GCGAATTTCG CTTAA
|
|---|
| Protein sequence | MEHTLPALPF AMDALEPHMS KETFEYHYAK HHQAYVTNLN NLIKGGEFES KSLEDIVKTA
PAGGIYNNAA QVWNHTFFWN CLTPNGGGAP SGALADAINK KWGSLDEFKK AFQTSAVGNF
GSGWTWLVKK ADGSVDIVNM GAAGTPLTTG DKALLCVDVW EHAYYIDYRN LRPKFVETFL
NNMVNWKFAE ANFA
|
|---|
| |