| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1004 |
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| Symbol | |
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| ID | 3671227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1072174 |
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| End bp | 1072656 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709685 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_314762 |
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| Protein GI | 74317022 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0551516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0366361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAGA TGCGCGTCGG CCACGGTTAC GACGTCCACG TGCTCGTCGA AAATCGCCGG
CTCATCATCG GCGGGGTCGA GATTCCCTAC GAGCGCGGCC TCGCGGGACA TTCGGACGCC
GACGTGCTGC TGCACGCGAT CTGCGACGCG CTCCTGGGTG CGGTCGGGCT CGGCGACATC
GGCCGGCATT TTCCGGACAC CGACGCTGCG TTCGCCGGCA TCGACAGCCG TATCCTGCTG
CGCCGCGTCG CGCAGCAATT GAAAGAGCGC GCCTGGCAAG TCGGCAACGT TGACGCGACC
ATCATCGCCC AGGCGCCGAA GATGGCGCCG CACATCGCGC GCATGACCGC CCACATCGCC
GACGATCTCG GCGTCGCGAT CGACCGCGTC AACGTCAAGG CGACGACCAC CGAAAGGCTC
GGCTTCGCCG GCCGCGGCGA GGGCATCGCC GCCGAGGCCG TATGCCTGAT CGAGCGTGGC
TGA
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| Protein sequence | MREMRVGHGY DVHVLVENRR LIIGGVEIPY ERGLAGHSDA DVLLHAICDA LLGAVGLGDI
GRHFPDTDAA FAGIDSRILL RRVAQQLKER AWQVGNVDAT IIAQAPKMAP HIARMTAHIA
DDLGVAIDRV NVKATTTERL GFAGRGEGIA AEAVCLIERG
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