| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1003 |
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| Symbol | |
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| ID | 3671226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1071480 |
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| End bp | 1072181 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709684 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
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| Protein accession | YP_314761 |
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| Protein GI | 74317021 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0351044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0384577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCT ACGCACTGAT ACCCGCTGCC GGCTCGGGCT CACGCATGGG CGGCGCGATC
GAAAAGCAGT ATATGGATGT CAACTCGGTG CCGATGATCG CGCACGCGAT GATGGTGCTC
GCGCGCGAGC CGCGCATCGC CCGAATTTTT GTTGTGCTCT CGCCGACCGA CAAGCGCTGG
AACAACTACG AATGGCAGGG CTGGGAGGAG CGCATCGAAG TCCTGCGCTG TGGCGGCGGG
ACCCGCGCCG AAACCGTGCT GAACGCGCTC GACGCCATCG CCGAGGTCTG CGACCCCGCT
GACTGGGTGC TCGTGCACGA CGCCGCGCGG CCCTGTCTGC CCGACGAAAT GCTCGGCAAG
CTGCTCGACG AAGTTGCGGA CGACCCGGTC GGCGGGTTGC TTGCGGTGCC GGTCGCCGAC
ACCCTCAAGC GCGCCGCTGG CGACACGTCA TCGGGCACGC GGGTTGAGGC CACCGTGCCG
CGTGCCGGCC TGTGGCAGGC GCAGACCCCG CAGATGTTCC GCCACGGCAC GCTGACCGAA
GCGCTGCGCG CGGCGGGCAG CGACATGACC GACGAGGCCT CGGCGATCGA GAAGCTCGGG
CTGCAGCCGC AGCTCGTCGA ATCCGACAGC CGCAACCTCA AGGTCACCTA TCCGCAGGAC
CTCGAACTCG CGAGCCTGAT CCTGGGGAAG ATGAATGCGT GA
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| Protein sequence | MKFYALIPAA GSGSRMGGAI EKQYMDVNSV PMIAHAMMVL AREPRIARIF VVLSPTDKRW
NNYEWQGWEE RIEVLRCGGG TRAETVLNAL DAIAEVCDPA DWVLVHDAAR PCLPDEMLGK
LLDEVADDPV GGLLAVPVAD TLKRAAGDTS SGTRVEATVP RAGLWQAQTP QMFRHGTLTE
ALRAAGSDMT DEASAIEKLG LQPQLVESDS RNLKVTYPQD LELASLILGK MNA
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