Gene Tbd_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0996 
Symbol 
ID3671219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1063289 
End bp1064143 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content67% 
IMG OID637709677 
Producthypothetical protein 
Protein accessionYP_314754 
Protein GI74317014 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.228151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTTC ATTTGTTCTG CCTGCTGCTC TCCGCTTTTG TTCCCGCTGC TCAGGCAGCG 
ATCGTCGAGC AGCAGATGCG GCCCGCCATC ACGGCGAGCG CCGAGTATGT GGTCGGCGAG
CGCGGGAAAC CGGCGGTCCT GCTGCTGCAC GGTTTCCTGC AAACCCGCGA ATTCCCCACG
ATCGCGACGC TGGGCCGCGG GTTGCAGAGC GCCGGGTTCA CCGTGCTCGC GCCGACACTG
AGCCTCGACA TTCCGAACCG CACACGCAGC CTGGCTTGCG AAGCCGCGCA CCGGCACGGC
ATGGATCAGG ATCTGATGGA GATCTCGCGC TGGGTGAGTT GGTTGAAAGC GCGCGGGCAT
GATTCGATCG TCCTCGTCGG GCACAGCTTC GGCAGCCTGC AGCTTCTCGC CTACCTGAGC
CAGAACCCCG ACCCGGCGGT GAAAGGCTAC GTCGGCGCTT CGCTGGTCGA CGCGCAGATC
GGGGCGCTCC CGCGCCAGCC GCTCATTGCC GACATGCAAA GCCGTGCGCA GAACGGACAG
CGCGATCTCG TGACCCGCTC GCTCTCGTTC TGCCGAAACT ACACCTCGAC GCCCGAGAGC
CTGCTGTCCT ACCTGCAATG GGATCCCTCG CGCGTGCTGG CCGCACTCAA GCGGTCGCCG
GTCGACACCC TGCTCATCAT GGGCGACGCC GACGAGCGCC TGGGCCGCGG CTGGCTGAAG
GCGCTACGCC ACATCCAGGT GCCGATGGTG ATCGTGCCCG GCGCCAGCCA CTTCATGGAC
GGGACCCACG AGTTCGAACT GCTCGAGCTC ACGCAGCGCT TCCTCGAAGC GCCCGAGCGG
AGGCCCGCAC GTTGA
 
Protein sequence
MRFHLFCLLL SAFVPAAQAA IVEQQMRPAI TASAEYVVGE RGKPAVLLLH GFLQTREFPT 
IATLGRGLQS AGFTVLAPTL SLDIPNRTRS LACEAAHRHG MDQDLMEISR WVSWLKARGH
DSIVLVGHSF GSLQLLAYLS QNPDPAVKGY VGASLVDAQI GALPRQPLIA DMQSRAQNGQ
RDLVTRSLSF CRNYTSTPES LLSYLQWDPS RVLAALKRSP VDTLLIMGDA DERLGRGWLK
ALRHIQVPMV IVPGASHFMD GTHEFELLEL TQRFLEAPER RPAR