| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0987 |
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| Symbol | |
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| ID | 3671210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1050974 |
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| End bp | 1053514 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709668 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_314745 |
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| Protein GI | 74317005 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.594505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCGT CCCCACTGCG CGGCCTGATC TTCAACGTCG GACTCGGATT CACCGCCGCC
CTGCTGTTGA TGCTCGCGGT GATCGGACTC GGCGTCACGC AGATGGCGCA GCTCAACGCC
GAACTCGAAC GCGTCGTGTC GGTGAACAAC GTCAAGACGC GCCTCGCGTC GCAGATGCGC
GACGCCCTGC GCGACCGCGC CGTCATCATG CACAACATCG TCGTGTCGAT CGACCCGTGG
GAGAAGGACG CCCTGTTCCT GCGCTTCCAG CGCTACGGCG AGCAGTACGC CAAGGACCGC
GGCCAGCTCG CGGCGATGCT CGCGACGCCC GAGGAAAAGC GGCTGATGGC CGAGCTCGAC
GCGATCACCT TCGCCAACCA GCCGGTGATG TTCGCGGTGG TCGAAGCCGC GCTCGACGAG
AACAACTACG GCGCACTGAC CCAGCTGCAG CGCGAGGCGA TCCCGTTGCA GAACCGCCTG
GTCGAGGCGC TCGACAACAT GACCAACCTG CAGCGCAAGG CCAACGAGGT CGCGCTCGGC
AAGACCTTCG ACGCCTATCA GGCGACGCGG ACGCTGATGC TCGTGCTCGG CATCTTCGCG
ACGCTTTTGG CGACGCTCGT CGCGGTGCTC GTAAGCCGGC GCATGCTGAC GCAGACGCGT
CAGCTCGAGA CCGAACGGCA GAAGTACCGG ACGCTCTTCG AAACCAATTC CGACGCGGTC
GTCATCCTCG ACGACCACGG CTTCACCGAC TGCAACCCGG CGACCTTGTC GATGTTCGGC
ATCGACTCCG TCGCCGACTT CGTCAACACC CCGATTCCCC GGCTTGGCAC GCCGATGCAG
GCCAACGGCG TGAGCGCCTC CGATCACGCG CGCCAGACCA TCGCAACGGC GCGCAGCACG
GGTCACGCGG TCATGGACTG GCAGGGACGC CGCGCCGACG GCACGACTTT TTTTGCCGAG
ATCGCTCTGC ATGCCATGCA GCTCGAAGGC CGGCCGGTGA TCCAGGCGAT CATGCGCGAC
GTATCGGAAC GCCGTGCCGC CGAGGCCGCC AAGGAAGCCG CGCGCGAAGC GGCCCTCCAG
ATGGCGCGCG CGAAGTCGGA ATTCGTCGCC AACGTCAGCC ACGAGATCCG CACGCCGATG
CACGGCATTC TCGGCATGAG CAGCCTGCTG CTCAAAACCC CGCTCGACGG GCGGCAGCGC
GAATACGTCT CGACGCTCAA GAGCTCGGCG GAAAGCCTGC TCAAGATCAT CAACGACATT
CTCGATTTCT CGAAGATCGA GGCGGGCAAG CTCGCGATCG AAGCGGTCGC GTTCTCGCCG
GTCGCGCTGA TGCAGGGAGT GGTCGCGCTC TTCCAGGCGC GGGCGCTCGA GAAGAACCTG
CAACTGACCC TCGCGCTCCA CGAGTCGCCT CCTCCGGCCC TGCTCGGCGA TCCCACGCGC
ATCCGCCAGA TCCTGCTCAA CCTCGTCGAC AACGCGATCA AGTTCACCGA TCGCGACCAT
GTCGAACTCT CGGGCAGCTT CGAAACCCTG GGCGACGAGG TCGCATGCCG CTTCAGCGTG
ACCGACAGCG GCATCGGCAT GAGCGCCGAG ACCCAGGCCG GCCTGTTCCA GGCGTTCTCG
CAGGCCGACT CGTCGACCAC GCGGCGCTAC GGCGGTACCG GCCTCGGACT CGCCATCAGC
AGCCAGCTCG CCGCCTTGAT GGGCGGCGAG CTGACGGTCG AGAGTGCGCC CGGCCGCGGC
AGCCGCTTCA CGCTTTCCGT CCGGCTCCCG ACGACCGATC TCCCGCTGGC CGAACTGCCG
GCGCCGAGCA GCGTCGAACT GCAGGGGCGC ATCCTGGTCG TCGAAGACCA CCCGGTCAAC
CAGAAGGTGC TCGCGCACCA ACTACGTGCA ATGGGCCTGC AGTACACACT CGCTGCCAGC
GGACGCGAAG CGCTGGAGCG CCTCGGCAGC GCCGACTTCG ATCTTGTGCT GATGGACTGG
CAGATGCCCG AAATGGACGG CCTCGAAGCG ACGCGGCGTA TTCGCCAGCT CCCCGGGCGG
GCGGGCCGTA CCCCGGTCGT CGCGCTTACC GCGAACGCCA GTGTCGGCTT TCGCGAGGCT
TGCCTCGCCG CGGGCGCCAA CGATTACCTC AGCAAGCCCT ACACCGAGGC CGCCCTGGTT
GCGCTGCTCA TGCAATGGCT GCCGGCGCCT GCGAGCGCGA CGGCCGAGGT CAAGGGCAGC
CTGCTCGACC GCGCGGCGCT CGATGCCCGC TACCCGGGAA ATCCCGAACT CGTCGGCGAG
CTGGAGCGGC TCTTCATCGC CACGACCAAG ACGAGCCTCG CGACCCTGAA ACAGGCGATT
GCCGCGCGGA ATCAAGCGGC CTGCCGCAAG GAAGCCCACG CACTGAAAGG CGCGGCGGCG
AGCGTGATGG CCGTCGCCGT GCAAGATGCC GCGGCGCGCA TCGAGGCGTG CGTGCAAAAC
GCGGATTTTG GCGGTGCGGC GGCCGAACTC GCCGTGCTCG AAGCGCTCGT CGCGGCCTAC
GCATTGACGC CCGCACTGTG A
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| Protein sequence | MLPSPLRGLI FNVGLGFTAA LLLMLAVIGL GVTQMAQLNA ELERVVSVNN VKTRLASQMR
DALRDRAVIM HNIVVSIDPW EKDALFLRFQ RYGEQYAKDR GQLAAMLATP EEKRLMAELD
AITFANQPVM FAVVEAALDE NNYGALTQLQ REAIPLQNRL VEALDNMTNL QRKANEVALG
KTFDAYQATR TLMLVLGIFA TLLATLVAVL VSRRMLTQTR QLETERQKYR TLFETNSDAV
VILDDHGFTD CNPATLSMFG IDSVADFVNT PIPRLGTPMQ ANGVSASDHA RQTIATARST
GHAVMDWQGR RADGTTFFAE IALHAMQLEG RPVIQAIMRD VSERRAAEAA KEAAREAALQ
MARAKSEFVA NVSHEIRTPM HGILGMSSLL LKTPLDGRQR EYVSTLKSSA ESLLKIINDI
LDFSKIEAGK LAIEAVAFSP VALMQGVVAL FQARALEKNL QLTLALHESP PPALLGDPTR
IRQILLNLVD NAIKFTDRDH VELSGSFETL GDEVACRFSV TDSGIGMSAE TQAGLFQAFS
QADSSTTRRY GGTGLGLAIS SQLAALMGGE LTVESAPGRG SRFTLSVRLP TTDLPLAELP
APSSVELQGR ILVVEDHPVN QKVLAHQLRA MGLQYTLAAS GREALERLGS ADFDLVLMDW
QMPEMDGLEA TRRIRQLPGR AGRTPVVALT ANASVGFREA CLAAGANDYL SKPYTEAALV
ALLMQWLPAP ASATAEVKGS LLDRAALDAR YPGNPELVGE LERLFIATTK TSLATLKQAI
AARNQAACRK EAHALKGAAA SVMAVAVQDA AARIEACVQN ADFGGAAAEL AVLEALVAAY
ALTPAL
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