| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0982 |
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| Symbol | |
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| ID | 3671205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1045142 |
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| End bp | 1046080 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637709663 |
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| Product | TPR repeat-containing Zn-dependent protease |
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| Protein accession | YP_314740 |
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| Protein GI | 74317000 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.165427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC GTGCGATGCA AATCAAGGCC CTCGTCCTCG CGGTCGCCCT CGGCCTGAGC
GGGGGTGCGA GCGCGATCGA TTTCGGCAAG CTGCTCGAAG AGCGCCTCAA CCAGGAATTG
AACAAGAACA AGCAGCCGCC CGCCGAGCAG ACGGCTCCGC CCGCGGCGCA GAGCGCGGCC
GCGTCGCCGC CTCCCGAGAA CCAGAAAATC GACGCGCGCC AGCTCGGTTT TGCCCTGTTC
GGCGACTACT CGCCCGAAGA GGAGGCGCGC ATCGGCCGCC AGATTTCCGG AAACCTTCTC
GGTGCCGTGC CGCTCGTACC TGACGACAAG CTGCAGAATT ACGTCAACCT CGTCGGCAAC
TGGGTCGCCG CGCAGAGCGG GCGCAGCGAC GTCAAGTGGC GTTTCGGCGT ACTCGACACC
GAGGACATCA ATGCTTTCGC GGCACCGGGT GGCTACGTGT TCATCACCAA GGGGCTTTAT
CGGCGGCTTG GCAACGAAGC GCAGCTCGCC GGTGTCCTCG GCCACGAAAT CGCTCATGTC
ACCAAGAAAC ATCACCTCAA GGTGCTCAAG CAGTCGAGCC TGATCGGCGC ACTCGGCCAA
GCCGCCAGCA AGAAGGCGAA GGACAGCGAT CAGGTGGTGC AGAACCTGAT CGGCAACGGG
GCCGAAATCA TGGCGCGCGG GCTCGACAAG AACGCCGAGT TCGAGGCGGA CCGCGTCGGC
ATCGTGTTCG CGGCGCGCGC CGGCTACGAG CCGTGGGGGC TTCCCGACGT TTTGCAGGAT
CTCGCCGGCC TGCCGGCCAA GGACGCGCGC ACCGGACTGC TGTTCAAGAC CCACCCGCAC
CCGGCCGACC GGCTGGCGGC GTTGGGCGAG GCGGTCGATG GCCGCCTCGA CGCCGTGCAG
GGCAAGACGC TCGCCGACCG CTTCTACCGC ATCAAGTGA
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| Protein sequence | MKTRAMQIKA LVLAVALGLS GGASAIDFGK LLEERLNQEL NKNKQPPAEQ TAPPAAQSAA
ASPPPENQKI DARQLGFALF GDYSPEEEAR IGRQISGNLL GAVPLVPDDK LQNYVNLVGN
WVAAQSGRSD VKWRFGVLDT EDINAFAAPG GYVFITKGLY RRLGNEAQLA GVLGHEIAHV
TKKHHLKVLK QSSLIGALGQ AASKKAKDSD QVVQNLIGNG AEIMARGLDK NAEFEADRVG
IVFAARAGYE PWGLPDVLQD LAGLPAKDAR TGLLFKTHPH PADRLAALGE AVDGRLDAVQ
GKTLADRFYR IK
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