| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0980 |
|---|
| Symbol | |
|---|
| ID | 3671203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1043700 |
|---|
| End bp | 1044494 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637709661 |
|---|
| Product | ABC-type transport system ipermease component |
|---|
| Protein accession | YP_314738 |
|---|
| Protein GI | 74316998 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0674411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCA TTGCGGCCTC CCTCGAATCG CTCGGCGCCA AGGTCGTCGG CTGGTTCACG
GTCGGCTACG CGATGTTCTC GTTCCTCGGC AAGGCAGGCC TGCTGCTGCT CGAGCGCGAG
ACCTGGAACC GCGCCACCTT CGACGTCGTC GTGAAGCAGG TCTACTTCAC CGCCGTACAG
ATTCTGCACG TTTTTCTCGG CTACGCCCTG GTCATTTCGT GGCTGATCAT AACGATCATT
CTGTCGACCG CGCGTGACTT CGGCCTGACC GCCTTCGCGA GCGAAATGAC GATCCGCGTG
CTCGTTCTCG AACTGCTGCC CTTCCTCACG GCCCTGTTCG TCGCCCTGCG TTCGGGCAGC
GCGATCAACA CCGAAGTCGC GTTGATGCAG GTGAACAACG AATTGGATGC GCTCGCGCAC
TGCAAGGTTC CACCGATGCA ATTCGAGTTC CTGCCGCGCC TGATCGGCGG CGTGGTGTCG
GTCGTCACGC TCGCCGGGCT CGCCGGGCTG CTCGCGCTGC TGCTCGGCTA TCTCGCGATC
TACGGCGCCG GAACGGCCGG CTTCGAGCCC TACACGCAGA CCATCGCCAA GATCTTCGAC
TTCGGCATCC TCGCCGGCCT GGTCGTGAAG TCCGCGCTCT TCGGCCTGGC GGTCACGCTA
ATCCCGGTGA CCGCCGGTCT CGAGACGCCT AAGAAGCTCT TCATGGTGCC GGTGTCGGTG
CTGCGCGGCA TGATGCGCGT ATTCTTCGCC ATTGTGGCGA TCGAGGTGGT GTCATTAGCG
CTCAAATACA TCTGA
|
|---|
| Protein sequence | MNSIAASLES LGAKVVGWFT VGYAMFSFLG KAGLLLLERE TWNRATFDVV VKQVYFTAVQ
ILHVFLGYAL VISWLIITII LSTARDFGLT AFASEMTIRV LVLELLPFLT ALFVALRSGS
AINTEVALMQ VNNELDALAH CKVPPMQFEF LPRLIGGVVS VVTLAGLAGL LALLLGYLAI
YGAGTAGFEP YTQTIAKIFD FGILAGLVVK SALFGLAVTL IPVTAGLETP KKLFMVPVSV
LRGMMRVFFA IVAIEVVSLA LKYI
|
|---|
| |