Gene Tbd_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0950 
Symbol 
ID3672742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1012196 
End bp1013371 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content67% 
IMG OID637709629 
ProductD-3-phosphoglycerate dehydrogenase 
Protein accessionYP_314708 
Protein GI74316968 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGG CCCGCAAGAT CCTCACGCTC AACGCGATTT CGGCGCGCGG TCTCGCGCGT 
CTGCCCGAGC ACTACGTCGT CGGCGGCGAC CTCGCCGACC CCGACGCGAT CCTCGTGCGC
TCGGCGAACA TGCACGAGAT GGAGATTCCG ACTTCCGTCT GCGCCATTGG GCGGGCCGGT
GCGGGGACCA ACAACATCCC GGTCAAGAAG ATGTCCGAGC GCGGCCTGCC GGTCTTCAAC
GCGCCGGGTG CGAACGCGAA CGCGGTCAAG GAGCTCGTGA TCGCCGGCAT GCTCATGGGC
GCGCGCAACC TCGTGCCGGC GCTCAAGTTC GTCGAGAGTC TTGACGGAAC GGACGAGGCG
ATGCACAAGG CGACCGAAGC CGGCAAGAAG CAGTTCGCCG GCATGGAGCT GCCGGGCCGC
ACGCTCGGCG TGATCGGGCT CGGCGCGATC GGCTCGCACA TCGCCGAAGC CGCGATCCGC
CTCGGCATGA ACGTCGTCGG CTACGACCCG GCGATCACCG TCGACGCGGC CTGGCGCCTG
CCTTCGCAGG TCAAGCGCGC CGAGAACGTC GACGACGTGC TGCGCACGGC GGACTTCGTC
ACGCTGCATG TACCGCTGCT CGACGCCACC CGCAACCTGA TCAACGCGCA GCGCCTGAGC
CTGATGCGTT CGGGCGCCGT GCTGCTGAAC TTTGCGCGCG AGGGTGTCGT CGACAACGCC
GCCGTGATCG AGGCGCTCGA CGCCGGCAAG CTGCACGCCT ACATCTGCGA TTTCCCGGCG
AACGCGCTCA AGGGCCACCC GAAGGTCGTG GCCCTGCCGC ATCTCGGCGC GAGCACCGAG
GAGGCCGAGG AGAACTGCGC CGTGATGGTC GCCGAGCAGC TCACCGACTA TCTCGAGAAC
GGCAACATCC TCAATTCGGT CAATTTCCCC AGTGTCGCGA TGCCTCGCGA GTCGGCCTTC
CGCCTCGCGA TCGCCAACGC CAACGTGCCG AACATGGTCG GGCAGATCTC GTCGGTGCTC
GCCGCCGCCG GCCTCAACAT CCACAACATG GTCAACAAGT CGAAGGGCGA CATGGCCTAC
ACGCTCGTCG ACGTCGACAG CGCGGTGGCG GGATCGGTCA TCGCGCAGCT CAACGCGATC
GGCGGCGTGC TCGGCGTGCG CTATCTGCCC GCATGA
 
Protein sequence
MAEARKILTL NAISARGLAR LPEHYVVGGD LADPDAILVR SANMHEMEIP TSVCAIGRAG 
AGTNNIPVKK MSERGLPVFN APGANANAVK ELVIAGMLMG ARNLVPALKF VESLDGTDEA
MHKATEAGKK QFAGMELPGR TLGVIGLGAI GSHIAEAAIR LGMNVVGYDP AITVDAAWRL
PSQVKRAENV DDVLRTADFV TLHVPLLDAT RNLINAQRLS LMRSGAVLLN FAREGVVDNA
AVIEALDAGK LHAYICDFPA NALKGHPKVV ALPHLGASTE EAEENCAVMV AEQLTDYLEN
GNILNSVNFP SVAMPRESAF RLAIANANVP NMVGQISSVL AAAGLNIHNM VNKSKGDMAY
TLVDVDSAVA GSVIAQLNAI GGVLGVRYLP A