| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0949 |
|---|
| Symbol | |
|---|
| ID | 3672741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1011124 |
|---|
| End bp | 1012203 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637709628 |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_314707 |
|---|
| Protein GI | 74316967 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.257293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTT ACAACTTCAG CGCCGGCCCG GCCGTGCTTC CCAAGGATGT GCTGCAGCAG
GTGCAAGCCG AGCTCGTCGA CTGGCACGGC AGCGGCATGT CGGTCATGGA AATGAGTCAC
CGCGGCAAGG AGTTCATGGG CATCGCGGCC GAGGCCGAAG CCGACCTGCG CGAGCTCATG
GCGATTCCGG CGAATTACAA GGTCCTGTTC CTGCAGGGCG GGGCGTCGTC GCAGTTCGCG
ATGGTGCCGA TGAACCTGCT GCGCGGAAAA GCCTCGGCCG ACTATCTCAA CACCGGCGAG
TGGTCGAAGA AGGCGATCAA GGAGGCGAAG AAGTACGCGG CCGTCAACGT CGTCGCGTCG
AGCGAAGACC GGAACTTCAG CTATGCGCCG ACGCAGGACC GGTGGAAGCT CGACCCGAAC
GCGGCCTACG TCCACTACAC GCCGAACGAG ACGATCGGCG GGGTCGAGAT CTTCTGGACG
CCCGAGGCCG GCGATGTCCC GATCGCCGCC GACATGTCGT CGACGATCCT CTCGCGTCCG
ATCGACGTCT CGAAGTACGG CGTGATCTAC GCCGGCGCGC AGAAGAACAT CGGCCCGGCC
GGGCTCACGA TCGTGATCGT GCGCGAGGAC CTGATGGGCG AAACCGTCGC CGGCACGCCG
ACGATGTTCG ACTACAAGAT CCACGCCGAC AACGAATCGA TGTACAACAC CCCGGCGACC
TTTGCCATGT ATACCGCTGG GCTCGTCTTC AAGTGGCTGA AGGCGCGCGG CGGCCTGGCC
GGCATGGAGA AGATCAACCG CGAGAAGGCG GCGCTGCTCT ACGAAGCGCT CGACGCGACC
GACTTCTACG CGTCGCCCGT GGCGAAGGAC AACCGCTCGC TGATGAACGT GCCGTTCACC
CTGAAGGACG CCGCGCTCGA CGAGGCCTTC CTCAAGGGCG CCAAGGAGCG CGGCCTGCTG
CAACTGAAGG GCCACCGTTC GGTCGGCGGC ATGCGCGCCT CGATCTACAA CGCGATGCCG
ACCGAGGGGG TGAAGGCGCT CGTCGACTAC CTCCACGCGT TCGAGAAGAA TCATGGCTGA
|
|---|
| Protein sequence | MTIYNFSAGP AVLPKDVLQQ VQAELVDWHG SGMSVMEMSH RGKEFMGIAA EAEADLRELM
AIPANYKVLF LQGGASSQFA MVPMNLLRGK ASADYLNTGE WSKKAIKEAK KYAAVNVVAS
SEDRNFSYAP TQDRWKLDPN AAYVHYTPNE TIGGVEIFWT PEAGDVPIAA DMSSTILSRP
IDVSKYGVIY AGAQKNIGPA GLTIVIVRED LMGETVAGTP TMFDYKIHAD NESMYNTPAT
FAMYTAGLVF KWLKARGGLA GMEKINREKA ALLYEALDAT DFYASPVAKD NRSLMNVPFT
LKDAALDEAF LKGAKERGLL QLKGHRSVGG MRASIYNAMP TEGVKALVDY LHAFEKNHG
|
|---|
| |