Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0948 |
Symbol | |
ID | 3672740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1008562 |
End bp | 1011111 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637709627 |
Product | DNA gyrase subunit A |
Protein accession | YP_314706 |
Protein GI | 74316966 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.309422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGT TTGCCAAGGA AACCCTCCCG GTCAGTCTCG AGGAGGAGAT GCGGCGTTCA TACCTCGATT ATGCGATGAG CGTGATCGTC GGCCGTGCAC TCCCCGACGT GCGCGACGGG CTCAAGCCCG TGCACCGTCG TGTGCTGTAC GCGATGAACG AGCTTGGCAA CGACTGGAAC AAGGCTTACA AGAAGTCGGC GCGCGTCGTC GGCGACGTCA TCGGTAAATA CCACCCGCAC GGCGACACGG CCGTCTACGA CACCATGGTC CGCATGGCGC AGGACTTCTC GCTGCGCTAC CCGCTGATCG ACGGCCAGGG CAACTTCGGC TCGGTCGACG GCGACAACGC CGCGGCGATG CGTTACACCG AAGTGCGCAT GGCGCGGATC GCGCACGAGT TGCTGGCCGA CCTCGACAAG GAAACAGTCG ACTTCGGCCC CAACTACGAC GGCTCCGAGC AGGAGCCGCT CGTGCTGCCG ACCAAGATTC CGAATCTGCT GATCAACGGT TCGTCGGGCA TCGCGGTCGG CATGGCGACG AACATCCCGC CGCACAATCT CACCGACATC TGCAACGCCC TGTTCGCGCT GCTCGACGCC CCCGCGACCG ACATCGAGTC GCTGATCAGC ATCGTCCAGG CGCCCGACTT TCCGACCGCC GGCATCATCT ACGGCCTTTC CGGCGTGCGC GACGGCTACC GTACCGGTCG CGGCCGCGTC GTCATGCGTG CGACCTGCCA CGTCGAGGAC CTCGACAAGA GCGGCGGCAA GCAGGCGATC ATCATCGACG AGCTGCCCTA TCAGGTGAAC AAGGCCAATC TGCTGATCCG GATCGGCGAA CTCGTGCGCG ACAAGCAGAT CGACGGCATC GCCGACCTGC GCGACGAGTC CGACAAGTCG GGCATGCGCG TCTACATCGA ACTCAAGCGC GGCGAGAACG CCGACGTGGT CCTGAACAAT CTGTACAAGC AGACACAGAT GCAGGACACC TTCGGCATGA ACATGGTCGC GCTGATCGAC GGGCAGCCGC GGCTCCTGAA CCTCAAGGAG ATGCTCGACG CCTTCCTGCG CCACCGCCGT GAAGTCGTCA CCCGGCGCAC CGTCTTCGAT CTCAGGAAGG CACGCGAGCG CGGCCACATC CTCGAGGGCC TGGCGGTCGC GCTCGCCAAC GTCGACGAGA TCGTCGAGTT GATCAAGTCG TCGGAAACGC CTGCGATCGC GAAGGAACGC CTGCTCGGCC GCGCGTGGAA GTCGGCGATG GTCGAGGAGA TGCTCGCGCG CATCGACCCC GAATATTCGC GGCCGGTGAA CATGGGGCCG GAATTCGGCC TGCACGCCGA TGGCTATCAC CTCTCGGAAA TCCAGGCGCA GCGCATCCTC GAAATGCAGT TGCAGCGCCT GACCAACCTC GAGTCGGACA AGATCCTCGC CGAGTACAAG GAAATCATGG CGAAGATCGC CGACCTGCTC GACATTCTGG CGAATCCGGC GCGCATCACC CAGATCATCC GCGAGGAACT GACCCAGGTC CGCGACCAGT TCGGCGATGG GCGGCGCTCG ACCATCGTCG AGAACGCGCA GGACATGTCG ATGGAAGACC TGATCAAGCC CGAGGAGATG GTCGTCACGC TGTCACACGG CGGCTACATG AAGTCGCAGC CGCTGGATGA TTACCGAGCA CAGAAGCGCG GCGGCCGCGG CAAGCAGGCG GCGGGGACCA AGGACGAGGA CTTCATCGAG AAGATGTTCG TCGCCAACAC CCACGACTAC ATCCTCTGCT TCTCCAACCG CGGGCGGCTG TACTGGCTCA AGGTCTACAA CGTGCCACAG GGCGGACGCG CCGCCCGCGG CAAGCCGATC GTCAACCTGC TACCGCTCGA GGACGGCGAG AAGATCAGCG CGCTCTTGCC GGTCAAGACC TTCGACGACG AGCACTACGT GTTCATGGCG ACCGCCAACG GCATCGTCAA GAAGACGCCG CTTTCCGAAT TCTCGCGCCC GCGCACGGCC GGCATCATCG CGGTCGGCCT CGACGACGGC GATGTGCTGT GCGGTGCGTC GATCACCGAC GGTCGTCACG ACGTGATGCT GTTCTCCGAT TCCGGCAAGG CCGTGCGCTT CGACGAGAAC GACGTGCGCC CGATGGGCCG TGCCGCGCGC GGCGTGATCG GCATGAAGCT CGCCAAGGGC GCCAAGCTGA TCTCGTTGCT CGTGGCTGAA GACGAGAACG ACTTCGTGCT CACGGCGACC GAAAACGGCT ACGGCAAGCG GACGCCGATC GCGGAATACA CGCGTCACGC GCGGGCCACG CAAGGCATGA TCGCGATCCA GACCAGCGAG CGCAACGGCA AGGTCGTCGC GGCCAACCTC GTCAAGGCGG ACGACGAAAT CATGCTGATC ACGACCGGCG GCGTGCTGAT CCGCACGCGC GTCAAGGAGA TCCGCGCGAT GAGCCGGGCG ACCCAGGGCG TCACGCTGAT CAATCTGGAC AAGGGCGAAA AGCTCATCAG CCTGGAAAAA GTAGCCGAGA CCGACAACGA AGAGGAATGA
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Protein sequence | MEQFAKETLP VSLEEEMRRS YLDYAMSVIV GRALPDVRDG LKPVHRRVLY AMNELGNDWN KAYKKSARVV GDVIGKYHPH GDTAVYDTMV RMAQDFSLRY PLIDGQGNFG SVDGDNAAAM RYTEVRMARI AHELLADLDK ETVDFGPNYD GSEQEPLVLP TKIPNLLING SSGIAVGMAT NIPPHNLTDI CNALFALLDA PATDIESLIS IVQAPDFPTA GIIYGLSGVR DGYRTGRGRV VMRATCHVED LDKSGGKQAI IIDELPYQVN KANLLIRIGE LVRDKQIDGI ADLRDESDKS GMRVYIELKR GENADVVLNN LYKQTQMQDT FGMNMVALID GQPRLLNLKE MLDAFLRHRR EVVTRRTVFD LRKARERGHI LEGLAVALAN VDEIVELIKS SETPAIAKER LLGRAWKSAM VEEMLARIDP EYSRPVNMGP EFGLHADGYH LSEIQAQRIL EMQLQRLTNL ESDKILAEYK EIMAKIADLL DILANPARIT QIIREELTQV RDQFGDGRRS TIVENAQDMS MEDLIKPEEM VVTLSHGGYM KSQPLDDYRA QKRGGRGKQA AGTKDEDFIE KMFVANTHDY ILCFSNRGRL YWLKVYNVPQ GGRAARGKPI VNLLPLEDGE KISALLPVKT FDDEHYVFMA TANGIVKKTP LSEFSRPRTA GIIAVGLDDG DVLCGASITD GRHDVMLFSD SGKAVRFDEN DVRPMGRAAR GVIGMKLAKG AKLISLLVAE DENDFVLTAT ENGYGKRTPI AEYTRHARAT QGMIAIQTSE RNGKVVAANL VKADDEIMLI TTGGVLIRTR VKEIRAMSRA TQGVTLINLD KGEKLISLEK VAETDNEEE
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