| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0933 |
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| Symbol | |
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| ID | 3672724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 988978 |
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| End bp | 991776 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637709612 |
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| Product | DEAD/DEAH box helicase |
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| Protein accession | YP_314691 |
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| Protein GI | 74316951 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.599756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.787262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTCAC TGGCTTCGAC CTTGGTCGAT TCGCAGGTCG ATCTGAATCC TCATCAAGTC
GAGGCCGCGC TCTTCGCTTG CCGCAACCCC CTCTCACGCG GCGTGATCCT CGCCGACGAG
GTTGGTCTGG GCAAGACCAT CGAAGCCGGC TTGGTCATCT CCCAACGCTG GGCGGAACGG
CGGCGGAAGG TGCTCATCAT CGTTCCGGCG AACCTGCGCA AGCAATGGCA CCAAGAGCTG
CAGGACAAGT TCGGCCTGCA AGGGCTGATC CTCGAAGCCA AAAGCTACAA CGCGATCCGC
AAACAGGAGC AGCGGAACCC GTTCCTGTTC GCCTCCGGTC CGATCATCTG TTCCTACCAG
TTCGCGAAGG CCAAGGCTGA CGATGTCAAG GGCATCGACT GGGACTTGGT CGTCCTCGAC
GAAGCGCATC GCCTGCGCAA CGTCTACAAG ACCAGCAACG TCATCGCCAA GACCCTCAAG
GAGGCGCTGT CGCGCGTTCA CTCCAAGGCG CTCCTGACCG CGACGCCGTT GCAGAACTCG
CTGCTCGAAC TCTATGGGCT GGTCAGCTTC ATCGATGACC GGGTGTTCGG AGACCTTGAT
AGCTTCCGCT CGCAATTCAC TGGCAGAGAG CAATCCTTCA GCAGCCTGCG TGACCGGCTG
GCCCCCATCT GCAAGCGCAC CCTGCGCAAA CAGGTTCAGC CCTACGTGTC GTACACAGCG
CGCAAGGCCA TCGTCGAGGA GTTCACGCCG TCGAGCGAAG AGCAGGAACT TTCCAGGCTC
GTCGCCGATT ACCTGCGCCG CCCCAACCTC AAGGCCCTGC CCGAGGGGCA GCGCCAACTG
ATTTCGCTCG TGCTGTGGAA GCTGCTCGCC TCCAGCACGC ACGCGATTGC GGGTGCGTTG
GAGACGATGG CCAAGCGTCT CCAGGGTGTG CTGAATGAAA CTCCCGTGGT TGCCGATCTC
GCCGAAGAAC TGGACGAGGA CTACGAGTCG CTCGACGAGA CCGCCGAAGA ATGGGAAGAC
CAGGAGCAGG GAACAAAGGC AGCGAGCCGC GCCGAGCGTG ATGCCATCGC GCAGGAGATC
GAGGAGCTGC GCCACTTCAG AACGCTGGCA ACCAACATCC GCGACAACGC CAAGGGCAAG
GCGCTGCTCA CCGCGCTGGA TCGCGCCTTC GCCGAACTGG ATCGGTTGGG CGCGGCCCGG
AAGGCCATCA TCTTCACCGA GTCCAAGCGC ACGCAGGAAT ACCTCCTCAA CTTGCTGGCC
GACACGCCAT ACGGCGACGG CATCGTGCTC TTCAACGGCA CCAATAGCGA CCAGCGTGCG
CAGGCGATCT ACAAGGACTG GCTGAAGCGC CACGAAGGCA CCGACCGCAT CACCGGCTCC
AAGACCGCCG ACACCCGTGC GGCACTGGTC GAGCACTTCA AGGAGCGTGG CAAGGTCATG
ATTGCCACCG AGGCTGGAGC CGAAGGCATC AACCTCCAGT TCTGCTCGCT CGTCATCAAC
TACGACCTGC CGTGGAACCC GCAGCGCATC GAGCAGCGCA TCGGGCGCTG CCACCGCTAC
GGTCAGAAGC ACGACGTGGT GGTGGTCAAC TTCGTCGACC GCAGCAATGA GGCCGATGCA
CGGGTGTATG AGCTGTTGTC GCAGAAGTTC CAGCTCTTCG AGGGCGTGTT TGGGGCTAGC
GACGAAGTGT TGGGCGCCAT CGGTTCGGGC GTCGATTTCG AGCGGCGTAT CGCCGAGATC
TACCAGAACT GCCGAGAGCC CGAGGAAATC AAGTCCAGCT TCGAGCAACT CCAGCTCGAC
CTCTCCGGCG AGATCAACGA GGCGATGGTC AAGACGCGCC AGGTATTGCT TGAGAACTTT
GATGAGGAGG TGCAGGAGAA GCTGCGCATG CGGGCCGACG ACAGCCGCAA CGCACGCAAC
CGCTTCGAGC GGATGCTGAT GGACTTGACC CGCGCCGAAC TGGTTCATTG CGCCGCGTTC
GATGACGACG GCTTCGATCT CCGCCACATA CCGACTGGAG TCGAGCACAG CGGCCTCACG
GGCATCGAGC TGGGGCGCTA CGAATTGCCC CGCCGCTCCG GCGACGCGCA CCTATACCGC
ATCAATCATC CGCTGGCGCG ATGGGGCATC GAGCAGGCCA AGGCTCGCGC ACTCAACGGG
GCTCGTCTCG TCTTCGACTA CAACGCCCAC GGTGCAAAGA TCAGCACGCT TGAAGCCTGG
CGCGGCAAAG CCGGATGGCT CACCGTGAAG CTGATCTCGG TCGAGACACT CGGCAACCAG
GAGCAACATC TGCTGGTTGC CGCGGGCACG ACCGATGGCG TCGTGCTCGC GGAAGAAGAC
CCGGAAAAAC TGCTGCGCCT GCCCGCGACC ACGCAGGCGG CCAATCTGTT CAACGCCCCT
GACGCCACCC TGCTGGCCGA CGTGGAAGCC CGCAAGACCG CGCTCCTGCG CGACGTCAAC
GAGCGCAACC TCGGCTACTT CGAGCAGGAA GTCCAGAAGC TGGATGCCTG GGCGGACGAC
CTGAAGCTGG GTCTGGAGCA AGAGATCAAG GAGATCGACC GCGAGATCAA GGAGGTGCGC
CGAACCGCCG CGACCTCGCC GACGCTGGAA GAGAAGCTGT CATGGCAGAA GAAGCAGCGC
GAACTGGAAG GCAAGCGCAG CAAGCTGCGC CGCGAGCTGT TTGCCCGGCA GGATGAAGTC
GAAGCGCAGC GCAACGACTT GATCAGCCAG CTTGAAGCGC AACTCCAACA GCAGGTCGAG
GAGCGCACGC TGTTCACTGT CGAGTGGGAG CTGGTCTGA
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| Protein sequence | MESLASTLVD SQVDLNPHQV EAALFACRNP LSRGVILADE VGLGKTIEAG LVISQRWAER
RRKVLIIVPA NLRKQWHQEL QDKFGLQGLI LEAKSYNAIR KQEQRNPFLF ASGPIICSYQ
FAKAKADDVK GIDWDLVVLD EAHRLRNVYK TSNVIAKTLK EALSRVHSKA LLTATPLQNS
LLELYGLVSF IDDRVFGDLD SFRSQFTGRE QSFSSLRDRL APICKRTLRK QVQPYVSYTA
RKAIVEEFTP SSEEQELSRL VADYLRRPNL KALPEGQRQL ISLVLWKLLA SSTHAIAGAL
ETMAKRLQGV LNETPVVADL AEELDEDYES LDETAEEWED QEQGTKAASR AERDAIAQEI
EELRHFRTLA TNIRDNAKGK ALLTALDRAF AELDRLGAAR KAIIFTESKR TQEYLLNLLA
DTPYGDGIVL FNGTNSDQRA QAIYKDWLKR HEGTDRITGS KTADTRAALV EHFKERGKVM
IATEAGAEGI NLQFCSLVIN YDLPWNPQRI EQRIGRCHRY GQKHDVVVVN FVDRSNEADA
RVYELLSQKF QLFEGVFGAS DEVLGAIGSG VDFERRIAEI YQNCREPEEI KSSFEQLQLD
LSGEINEAMV KTRQVLLENF DEEVQEKLRM RADDSRNARN RFERMLMDLT RAELVHCAAF
DDDGFDLRHI PTGVEHSGLT GIELGRYELP RRSGDAHLYR INHPLARWGI EQAKARALNG
ARLVFDYNAH GAKISTLEAW RGKAGWLTVK LISVETLGNQ EQHLLVAAGT TDGVVLAEED
PEKLLRLPAT TQAANLFNAP DATLLADVEA RKTALLRDVN ERNLGYFEQE VQKLDAWADD
LKLGLEQEIK EIDREIKEVR RTAATSPTLE EKLSWQKKQR ELEGKRSKLR RELFARQDEV
EAQRNDLISQ LEAQLQQQVE ERTLFTVEWE LV
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