Gene Tbd_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0921 
Symbol 
ID3672712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp974461 
End bp975510 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content65% 
IMG OID637709600 
Productpeptide chain release factor 2 
Protein accessionYP_314679 
Protein GI74316939 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.181333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.893084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACCCA GCTCAGGGGG TTTCTTTGAC TACCCTGTCA AGAAAGACCG CCTAGAAGAA 
GTCGTCCGCC TGTCCGAAGC GCCCGATTTC TGGAACGACG CCGCGCGCGC CCAGGAACTC
GGGCGCGAAC GCAAGTCGCT CGAGGACGTC GTCCTCGTGC TCGACCGCGT GACCTCGGGC
CTCAAGGACG CCGGTGAACT GTTCGAGATG GCGCGCGAGG AGAACGACGA CGACACGCTC
GCGGCGGTGC AGGCCGACAT CGACGGCCTC GAGAAGGACG TCGCGACGCT CGAGTTCCGC
CGCATGTTCA GCAACCCGGC GGACCCGTCC AACTGCTTCC TCGACATCCA GGCCGGCGCG
GGCGGCACCG AGGCCTGCGA CTGGGCGTCG ATGCTGTTGC GGCAATATCT CAAATATGCC
GAGCGCAAGG GCTTCAAGGC CGAGCTGCTC GAGGAATCCG AAGGCGACGT CGCCGGCATC
AAGTCGGCGT CGATCAAGAT CGAGGGCGAC TACGCCTACG GCTACCTGCG CACCGAGACC
GGCGTGCACC GCCTCGTGCG CAAGTCGCCG TTCGACTCCT CGGGCGGGCG TCACACCTCG
TTCGCGAGCG TGTTCGTCTA TCCCGAGGTC GACGACTCGA TCGAAGTCGA GATCAATCCG
GCCGACCTCA GGGTCGACAC CTACCGCGCG TCGGGCGCCG GCGGCCAGCA CATCAACAAG
ACCGACTCGG CCGTGCGCAT CACGCACATT CCGTCGGGCA TCGTCGTCCA GTGCCAGAAC
GACCGCTCGC AGCACAAGAA CCGCGCCGAG GCGATGTCGA TGCTGAAGTC GAAGCTCTAC
GAAGCCGAGC TGCGCAAGCG CCAGGCCGAA CAGGACAAGC TCGAAGCCGG CAAGGCCGAC
GTCGGCTGGG GCCACCAGAT CCGCTCCTAC GTGCTCGACA ATTCGCGGAT CAAGGACCTG
CGCACCAACG TCGAAGTCTC CGCGACGCAG AAAGTGCTCG ACGGCGACCT CGACGTGTTC
ATCGAAGCAA GCCTCAAACA AGGCGTCTAG
 
Protein sequence
MQPSSGGFFD YPVKKDRLEE VVRLSEAPDF WNDAARAQEL GRERKSLEDV VLVLDRVTSG 
LKDAGELFEM AREENDDDTL AAVQADIDGL EKDVATLEFR RMFSNPADPS NCFLDIQAGA
GGTEACDWAS MLLRQYLKYA ERKGFKAELL EESEGDVAGI KSASIKIEGD YAYGYLRTET
GVHRLVRKSP FDSSGGRHTS FASVFVYPEV DDSIEVEINP ADLRVDTYRA SGAGGQHINK
TDSAVRITHI PSGIVVQCQN DRSQHKNRAE AMSMLKSKLY EAELRKRQAE QDKLEAGKAD
VGWGHQIRSY VLDNSRIKDL RTNVEVSATQ KVLDGDLDVF IEASLKQGV