| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0916 |
|---|
| Symbol | |
|---|
| ID | 3672707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 971836 |
|---|
| End bp | 972495 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637709595 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_314674 |
|---|
| Protein GI | 74316934 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.964327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.840597 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTGC CTGCCCGTTT TCCTGCCATT TACTTGCGGC CGCTGCGGTT TCTCGCCGCA
GCCTGCGTCC TGGCGCTGCT GCACGCGCCC CCGTTCGCCG ATGCCAGCGG GGTGCCGGCC
GAAAATCGCG AACGGCTGAT CGCGACCAAC AGCTGTCCGG GCTGCGACCT GCGCGGCGTC
GAACTCGCGC AGCAGAACCT TCTCGGCGCC GACCTGCAGC AGGCGGACCT CTCGCGTGCC
GATCTGCGCG GCACCTCGTT GCAGGGCGCC AATCTCGCGG AGGCCCGCCT CGTCGACGTC
GACCTGCGCG GGGCGGTGAT CGGCGGGACG GCCATGAGCG GCGCCGACCT GCGCGGCGCC
AAGCTGGCGG GCGTCAACGC CAACCGGACG CGCTTCACGC AGGCGGACCT CAGCGGCGCC
GACCTCAGCG ATGCGCTGCT CGAGCACGCC GATCTCGAGG GCGCGAGGCT GCACGGGACC
CGCTTCACCA ACGCCGATCT GTACGAAGCC CGTTTCCTGT TTGCGGAAAT GGCGGACACG
GATTTTTCCG GCGCAAACCT GCACGAGGCC GATTTCAGCG ACGCCGAGGT GTCCGGCATG
CGGACCGACG GCCGCACCAC CTGCGTCGAC CTGAAGCCCG GGCCGTGCAG GCTCGATTAA
|
|---|
| Protein sequence | MTLPARFPAI YLRPLRFLAA ACVLALLHAP PFADASGVPA ENRERLIATN SCPGCDLRGV
ELAQQNLLGA DLQQADLSRA DLRGTSLQGA NLAEARLVDV DLRGAVIGGT AMSGADLRGA
KLAGVNANRT RFTQADLSGA DLSDALLEHA DLEGARLHGT RFTNADLYEA RFLFAEMADT
DFSGANLHEA DFSDAEVSGM RTDGRTTCVD LKPGPCRLD
|
|---|
| |