Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0910 |
Symbol | |
ID | 3672701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 966718 |
End bp | 967422 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637709589 |
Product | TonB protein |
Protein accession | YP_314668 |
Protein GI | 74316928 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.979068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCTT TGCGCATGGA CTGGAATCGG GCGATCGGGC TGCTGGTCGT GGTGGGGCTG CACGGCGGCC TGCTCTATGG CCTATGGAGC GTGCGCGTGA TTCCGCCGCC GTCGGAGGCG TTGACGCTGT TCGTCAGCTT CGTCGCGCCG CCGCCCGAGC CCGTGCAGGC CACGGCCCCG CCGCCCAAGC CGGCCAAGCC GCGTACGCCG CCGCCAAAAC CGGCGCCGAA GCCCGAGCCG CATCGCCATC TCGCCGCGCA GGCGCCGGTG CTGTCGCCGC GGGAAATCGT CGAGCCGACA CCCGAGCCGG TCGTCGAACC GGTCATCGCT CCGGCGCCGG CCGTACCCGA CCCCGCGCCG CGCGCACCGG AGGCGCCGCC CGCACCGCCG CCGGCGCCCG CCCCGGCAGG ACCGCTGACG CTGCCCTCGG AACTCGCGCT CGGCTGTCCC GAGCGTACGG CGCCCGCCTA CCCGCGGCTC TCGCGCCGGC TCGGTGAAAG CGGAAAGGTC GTGCTGCGCG TGGAACTCGA CGAAACGGGC CGCGTCGCCG GCGCACAGGT CGCGAGCAGC AGCGGTTCGC CGCGACTCGA CGCCGCCGCG CTCGCCGCGG TCCGCACCTG GCGATGCCGG CCGGCCCAGC GCGACGGACG CGGCGTGCGC GCCATCGCGA CCCAACCATT CAATTTCACT CTGGAAGGAC CCTGA
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Protein sequence | MKALRMDWNR AIGLLVVVGL HGGLLYGLWS VRVIPPPSEA LTLFVSFVAP PPEPVQATAP PPKPAKPRTP PPKPAPKPEP HRHLAAQAPV LSPREIVEPT PEPVVEPVIA PAPAVPDPAP RAPEAPPAPP PAPAPAGPLT LPSELALGCP ERTAPAYPRL SRRLGESGKV VLRVELDETG RVAGAQVASS SGSPRLDAAA LAAVRTWRCR PAQRDGRGVR AIATQPFNFT LEGP
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