Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0893 |
Symbol | |
ID | 3672684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 942698 |
End bp | 944203 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637709572 |
Product | lysyl-tRNA synthetase, class-2 |
Protein accession | YP_314651 |
Protein GI | 74316911 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC CCACCAACGC CCCCGCCCTC GACGAAAACC AGATCATCGC CGAGCGCCGC GCCAAGCTCG CCGCGATCCG CGAGGCGGGC GTCGCCTTCC CCAACGACTT CGAGCGCCGC GACTACGCCG GCAGGCTCGC GCACGAACAC GGCGACAAAT CCAAGGAAGC GCTCGAAGCC GAGGCCGTCG ACGTGCAGCT GGCGGGCCGC ATGATGCTCA AGCGCGTGAT GGGCAAGGCG AGCTTCGCGA CGCTGCAGGA CATGAGCGGC CGCATCCAGG TCTACGTCTC GAACGACCTG ACCGGGCTCG ACGCGCACGA GGCGTTCAAG CGCTGGGACC TCGGCGACTT CGTCGGCGTG AGCGGCACGC TGTTCAAGAC CAACAAGGGC GAACTGACGA TCCAGGCAAA ATCGGTCCGC TTGCTGTCGA AGGCGCTGCG TCCGCTGCCG GAAAAATTCC ACGGGCTCGC GGACCAGGAA CAGAAGTACC GCCAGCGCTA TCTCGACCTC ATCACCAACG ACGACGCGCG GTCGACCTTC GTGCGCCGCT CGAAGATCAT CCAGGCGATC CGCGAATTCA TGACCGGCCA CGGCTTTCTC GAAGTCGAGA CGCCGATGAT GCACCCGATC CCCGGCGGCG CCGCGGCCAA GCCCTTCGTC ACCCACCACA ACGCGCTCGA CATGGAGCTC TTCCTGCGCA TCGCGCCCGA GCTCTATCTC AAGCGGCTCG TCGTCGGCGG CTTCGAGAAG GTGTTCGAGA TCAACCGCAA CTTCCGCAAC GAGGGCTTGA GCACGCGCCA CAACCCCGAG TTCACGATGA TGGAGTTCTA CGAGGCCTAC CGCGAATATC GCTACCTCAT GGACTTCACC GAGGCGCTGA TCCGCCACAC CGCGGTCGCC GCGACCGGCT CGACGACGAT TTCCTACCAG GGAAGCACGA TCGAACTCGG CACGCCCTTC GACCGCCTGA CCATCGTCGA GGCGGTGCGC AAATACCACC CCGAGTACAC CGTCGAGCAA CTCAACGATC GCGACTGGCT GACCGCGCAA TTCACGGCGA TGAAGGCCAA GTACCGCGAG CACGACGGGC TCGGCGGCCT GCAGCTGACC TTCTTCGAGG AGACGACCGA GGCGCTGCTC GTGCAGCCGA CCTTCATTGT CGACTACCCG GCCGAAGTCT CGCCGCTGGC GCGTCGCTCC GACACGCAGC CCGAGATCAC CGAGCGCTTC GAACTCTTCA TCACCGGCCG TGAAATGGCG AACGGCTTTT CCGAATTGAA CGACGCCGAG GACCAGGCCG AACGCTTCAT GGAGCAGGTG CGCGCCAAGG AAGCCGGCGA CGAGGAGGCG ATGCACTACG ACGCCGACTT CATCCGCGCG CTCGAACACG GCCTGCCGCC GACCGGCGGC TGCGGCATCG GCATCGACCG CCTCGTGATG CTGCTCACCG ATTCGCCGTC GATCCGCGAC GTCATCCTCT TCCCGCAGAT GCGGCGCGAG GCCTGA
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Protein sequence | MTDPTNAPAL DENQIIAERR AKLAAIREAG VAFPNDFERR DYAGRLAHEH GDKSKEALEA EAVDVQLAGR MMLKRVMGKA SFATLQDMSG RIQVYVSNDL TGLDAHEAFK RWDLGDFVGV SGTLFKTNKG ELTIQAKSVR LLSKALRPLP EKFHGLADQE QKYRQRYLDL ITNDDARSTF VRRSKIIQAI REFMTGHGFL EVETPMMHPI PGGAAAKPFV THHNALDMEL FLRIAPELYL KRLVVGGFEK VFEINRNFRN EGLSTRHNPE FTMMEFYEAY REYRYLMDFT EALIRHTAVA ATGSTTISYQ GSTIELGTPF DRLTIVEAVR KYHPEYTVEQ LNDRDWLTAQ FTAMKAKYRE HDGLGGLQLT FFEETTEALL VQPTFIVDYP AEVSPLARRS DTQPEITERF ELFITGREMA NGFSELNDAE DQAERFMEQV RAKEAGDEEA MHYDADFIRA LEHGLPPTGG CGIGIDRLVM LLTDSPSIRD VILFPQMRRE A
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