Gene Tbd_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0889 
Symbol 
ID3671613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp937514 
End bp938638 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content68% 
IMG OID637709568 
Producthypothetical protein 
Protein accessionYP_314647 
Protein GI74316907 
COG category[S] Function unknown 
COG ID[COG4398] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.997447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACAGG CTGAGACGGA ATCCATGAGC GCCCCCTTCA AATATGCCCA CGCCGCGGCG 
GCGGCCTGGC GGGAGGCCGC GGAGGCCTGC GTCGAGCGGA TCGGGGCGGT GCCGGCGAAC
GCGACCCTCG GTTTTCTTTA CGTCTCCGAC GCCTTCGCCG ACGAACTCGA GGCCATCCTC
GCCTTTTTCA AGGGGGCCAC CGGCGTCGTC CACTGGACGG GCAGCGTCGG CGTCGGCGTC
TGCGCCACCG GGCACGAATA CCTCGACGAG CCGGCGATCG CCGTCATGCT CGGCGAATTC
GCGCCCGCCG ATTTCACGAT GCTGCCGCTG CTGCGCTCGA CGGCCGAAAT CGGCGCCGAG
CCCGCGAGCG GCTACTTCGC CGTCGTTCAC GGCGACCCTG CGAACGGCCA TATCCAGGAA
TTGATCGAGG GCGTTTCGGC GCAGGTATCG AGCGGCTTCG TCGTCGGCGG CCTGTCGAGT
TCACGCGGCA CGGCGCGGCA GATCAGCGAC GAGGTCGTCA GCGGCGGGCT GTCGGGCGTC
GTGTTCAGCG AGCGCGTGAA GCTCGCGACG CGTCTGACGC AGGGCGTTTC GCCGCTCGGT
CCGCGCCACG AGATCACGGC TGCCAACAAG AACGTCGTCG GCAGCCTCGA CCACCGGCCG
GCGCTCGAAG TGATGAAAGA GGAAATCGGC GAAGTGCTCG CGCGCGATCT GCGCCGCGCG
GCCGGCTACA TTTTCGTCGG CCTGCCGGTC CGCGGCTCCG ATACGGGCGA CTACCTGGTG
CGCAACATCC TCGGCGTCGA CCCGCAGAAC AATCTGGTCG CCGTCGGCGA ACAACTCGCG
CCCGGCGACG ACCTGCTGTT CTGCCGACGC GACGAGCAGA CGGCCGAACA AGACCTGCTG
CGCATGCTCG CCGCGATCCG TGCGCAACTC GGCACGGCGA TCCGGGGCGG CGTGTATTAT
TCCTGCCTCG GTCGCGGCCG CCACATGTTC GGCGCGCCCA ACCGGGAGCT GGAGCTCATT
CGCGAGACCC TGGGGGATTT CCCGCTGGTC GGCTTTTTCG CCAACGGCGA GATCTCGCAT
AACCGTTTAT ACGGCTACAC AGGAGTGCTG ACCCTGTTTG GCTGA
 
Protein sequence
MRQAETESMS APFKYAHAAA AAWREAAEAC VERIGAVPAN ATLGFLYVSD AFADELEAIL 
AFFKGATGVV HWTGSVGVGV CATGHEYLDE PAIAVMLGEF APADFTMLPL LRSTAEIGAE
PASGYFAVVH GDPANGHIQE LIEGVSAQVS SGFVVGGLSS SRGTARQISD EVVSGGLSGV
VFSERVKLAT RLTQGVSPLG PRHEITAANK NVVGSLDHRP ALEVMKEEIG EVLARDLRRA
AGYIFVGLPV RGSDTGDYLV RNILGVDPQN NLVAVGEQLA PGDDLLFCRR DEQTAEQDLL
RMLAAIRAQL GTAIRGGVYY SCLGRGRHMF GAPNRELELI RETLGDFPLV GFFANGEISH
NRLYGYTGVL TLFG