Gene Tbd_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0878 
Symbol 
ID3671643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp927586 
End bp928395 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content60% 
IMG OID637709557 
ProductGTP cyclohydrolase 
Protein accessionYP_314636 
Protein GI74316896 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.76872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA TTTGCGACAC CGCCGTTTGC ATGCCAGACG TGCAAAGCTC GGCCGATACC 
CGGCAAATCG CCATCGACAA GGTCGGCATC AAGAGCATTC GCCATCCCGT CCGCGTCGCC
GACAAGGCCG ACGGCGTGCA GCACACGATC GCGAATTTCA ACATGTACGT ATTCCTGCCC
CATAACTTCA AGGGCACGCA CATGTCGCGT TTCATCGAAA TCCTCAACAC GCGCGAGCGC
GAAATCTCGG TCGAGAATTT CGAGGGCATG CTGCGGCAGA TGGTCGAGCG CCTGGAAGCC
GAATCGGGCT ACATCGAGAT GACGTTCCCC TACTTCATCA ACAAGTCGGC GCCCGTGTCC
GGCGTGCAGA GCATGCTCGA CTACGAAGTC ACCTTCGTCG GCGCGATCGA GAACGGCCAG
TACACGCACA CCACGAAGGT CGTCGTGCCG GTGACCAGCC TGTGCCCCTG CTCGAAGAAA
ATTTCCGAAT ACGGTGCGCA CAACCAGCGC TCGCACGTCA CCGTCACGGC GAAAACCCGC
GGCTTCCTGT GGATCGAGGA TCTCGTGCGC AAGGTCGAGG ATCAGGCGTC GTGCGAACTG
TTCGGCCTGC TCAAGCGCCC GGACGAGAAA TACGTCACCG AGCGCGCCTA CGACAATCCG
AAGTTCGTCG AGGACATCGT GCGCGACGTC GCGGCGGCGA TGAATGCCGA GCCGCTGATC
GACGCCTACG TGGTCGAGGC GGAGAACTTC GAGTCGATCC ATAACCACAG CGCCTACGCG
CTGATCGAGC ACGACAAGCG CAAAAAATAG
 
Protein sequence
MNEICDTAVC MPDVQSSADT RQIAIDKVGI KSIRHPVRVA DKADGVQHTI ANFNMYVFLP 
HNFKGTHMSR FIEILNTRER EISVENFEGM LRQMVERLEA ESGYIEMTFP YFINKSAPVS
GVQSMLDYEV TFVGAIENGQ YTHTTKVVVP VTSLCPCSKK ISEYGAHNQR SHVTVTAKTR
GFLWIEDLVR KVEDQASCEL FGLLKRPDEK YVTERAYDNP KFVEDIVRDV AAAMNAEPLI
DAYVVEAENF ESIHNHSAYA LIEHDKRKK