Gene Tbd_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0876 
Symbol 
ID3671641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp926193 
End bp926903 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content65% 
IMG OID637709555 
Producthypothetical protein 
Protein accessionYP_314634 
Protein GI74316894 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCTG TTCTGATTTT TCAGCACTCC CCGATCGAGG GGCCCGGCTA CTTCGCGAGC 
TTTCTCGACC GCCACGACAT TCCCTGGCAC CTGGTCCGTA TCGACGCCGG CGAACCCGTG
CCCTCCGCAC TTAACGGCGT TTCCGGCGTC TGCTTGATGG GCGGACCAAT GAGCGTGAAC
GACGATCTGC CCTGGATATC GCCTTTGCTC GCGTTGATCC GGCAGGCAGT GGCAGCGGAC
ATACCCGTGA TCGGCCATTG CCTGGGCGGC CAACTGATGG CCAAGGCACT TGGCGCGGGC
GTCGGCGCAA ATCCGGTCAA GGAAATCGGC TGGGGCGAGG TACGGGTCAC CGACCCCGCC
GCGGGCCCCT GGCTCGGGGA CGACGCCGAG CCGCTACAGG TCTTCCACTG GCACGGCGAA
ACCTTCGCGC TGCCGGCGGG TGCGACGCGC ATCCTCGAAA GCGCGTGGTG CGCGAACCAG
GCTTACGTGC TGAACGGCAT CCACCTCGGC ATGCAGTGCC ACATCGAGAT GACGCCTGAA
CTCATCGCCA CCTGGTGCGA ACACGGGGCG GACGAAATCG CCGGGGCGCG CGAAAGCCCG
GCCGTGCAGG CCCCCGAAAC CATCGCAGCC GAGACGGTCG AACGCATCGC GCCGCTTCAC
AGGCTCGCCG ACAAAATTTA TTCCCGCTGG ATTCAAGGGC TTAGCCGCTG A
 
Protein sequence
MHPVLIFQHS PIEGPGYFAS FLDRHDIPWH LVRIDAGEPV PSALNGVSGV CLMGGPMSVN 
DDLPWISPLL ALIRQAVAAD IPVIGHCLGG QLMAKALGAG VGANPVKEIG WGEVRVTDPA
AGPWLGDDAE PLQVFHWHGE TFALPAGATR ILESAWCANQ AYVLNGIHLG MQCHIEMTPE
LIATWCEHGA DEIAGARESP AVQAPETIAA ETVERIAPLH RLADKIYSRW IQGLSR