| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0863 |
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| Symbol | |
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| ID | 3671628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 913981 |
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| End bp | 915012 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637709542 |
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| Product | trans-hexaprenyltranstransferase |
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| Protein accession | YP_314621 |
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| Protein GI | 74316881 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0603068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACG GCGCCCACAC TGCTACCATT GCTGATTTCG CAACCGCTCC CCCATCCCCT
ATCGTGTCCC TGGAAAGCCT GCAATCGTTT CTGGCCGATG ATATGCGCGC CGTCGATCAT
GTCATCCGCG AGCGCCTGTA TTCCGACGTG GTGCTGATCC GCCAGGTCTC GGAATACATC
ATCAACAGCG GGGGCAAACG CCTGCGTCCG GCGCTCGTGC TGCTGTCGGC CGGTTGCTTC
GGCTACCGCG GACAGGCGCA TCACGAACTC GCCGCGGTCG TCGAGTTCAT CCACACGGCC
ACCTTGCTGC ACGACGACGT CGTCGACGAA TCTGAACTCC GTCGCGGCCG CGAAACCGCC
AACGCGCTGT TCGGCAACGC GGCGAGCGTG CTGGTGGGCG ACTTCCTCTA TTCGCGCGCG
TTCCAGATGA TGGTCGGCGT CGACAACATG GAAGTCATGC GCATCCTGTC CGATGCGACC
AATACCATCG CCGAAGGCGA GGTCCTGCAG CTGCTCAACT GCCACGACCC CGACATCGAC
GAAGAAAACT ATCTGCGCGT GATCCGCTAC AAGACCGCGA AGCTGTTCGA GGCCGCGGGA
CGCCTCGGCG CTGTCATCGG CGGCGGCAGC GAAGCCGACA AGGACGCACT GGCGCGCTAC
GGCATGCACC TCGGCACTGC CTTCCAGTTG ATCGACGACG TGCTCGACTA CTCGGGCGAC
TTCCTCAAGA CCGGAAAGAA CATCGGCGAC GACCTCGCCG AAGGCAAGCC CACGCTGCCG
CTCCTCTATG CCATGAAGCA CGGCAGCGCG GCGCAGGCCG CGAGCATTCG TCACGCGATC
GAACACGGCG GCCTGACCGA ATTCCAGAGC GTGCTCGCCG CGATCAAGGA TACCAACGCG
CTGCAATACA CGCGTGAAGT CGCACAGCGC GAAGTGCAGA CGGCCAATGC AGCAATTTCT
CGTCTGCCGG ATTCAAATTC CAAAACAGCT TTGCTACAAT TGGCGGCTTT CGCGGTCGAG
CGAAGTTTTT GA
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| Protein sequence | MKNGAHTATI ADFATAPPSP IVSLESLQSF LADDMRAVDH VIRERLYSDV VLIRQVSEYI
INSGGKRLRP ALVLLSAGCF GYRGQAHHEL AAVVEFIHTA TLLHDDVVDE SELRRGRETA
NALFGNAASV LVGDFLYSRA FQMMVGVDNM EVMRILSDAT NTIAEGEVLQ LLNCHDPDID
EENYLRVIRY KTAKLFEAAG RLGAVIGGGS EADKDALARY GMHLGTAFQL IDDVLDYSGD
FLKTGKNIGD DLAEGKPTLP LLYAMKHGSA AQAASIRHAI EHGGLTEFQS VLAAIKDTNA
LQYTREVAQR EVQTANAAIS RLPDSNSKTA LLQLAAFAVE RSF
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