| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0854 |
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| Symbol | |
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| ID | 3671618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 903000 |
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| End bp | 904241 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637709532 |
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| Product | isocitrate dehydrogenase (NADP) |
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| Protein accession | YP_314612 |
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| Protein GI | 74316872 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.515822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTATC AGCACATCCA GATCCCCGCT GCCGGCCAGA AGATCACGGT CAACGCCGAC
AACACCCTCA ACGTGCCCGA CACGCCGATC ATTCCCTTCA TCGAAGGCGA CGGCACGGGC
GTCGACATCA CGCCTGCGAT GAAGAAGGTC GTCGACGCGG CGGTCGCCAA GGCCTACGGC
GGCCGGCGCC AGATCGCCTG GATGGAGGTC TTTGCCGGCG AGAAAGCCGT CAAGGTCTAC
GGCGGCGACC AGTGGTTGCC CGAAGAAACC GTTTCCGCCG TCAGGGACTA CGTGATTTCG
ATCAAGGGCC CGCTGACGAC GCCGACGTCG GGCGGCATCC GTTCGCTCAA CGTCGCGTTG
CGCCAGATCC TCGATCTCTA CGTCTGCCTG CGCCCAGTGC GCTACTTCGC GGGCGTGCCC
AGCCCGGTGA AGGCGCCCGA GAAGGTCGAC ATGGTTATCT TCCGCGAGAA CACCGAAGAC
ATTTACGCCG GCGTCGAATG GGAAGCCAAC TCCGACGAGG CGAAGCGCGT CATCAAGTAC
CTGCAGCGGC AGATGGGCGT GAAGAAGATC CGCTTCCCCG CCACCTCGGC GATCGGCATC
AAGCCCGTCT CGATCGAGGG TTCGGAACGG CTGATCAGAA AAGCGATCCA GTACGCGATC
GACAACAAGC GCCGCTCGGT GACCCTCGTG CACAAGGGCA ACATCATGAA GTTCACCGAA
GGCGGTTTCA AGAAGTGGGG CTACGAACTC GCCGCGCGTG AGTTCGGCGC CAAGCTGATC
GGCGAAGGCC CGTGGATGGA ATTGCCGAAC GGAATCGTGA TCAAGGACGT GATTGCCGAC
GCCTTCCTGC AACAGATCCT GCTGCGCCCC GACGAGTACG ACGTGATCGC GACGCTGAAC
CTCAACGGCG ACTACATCTC CGACGCGCTG GCGGCGGAAG TCGGCGGCAT CGGCATCGCG
CCGGGCGCGA ACCTCTCGGA CACCGTCGCG ATGTTCGAAG CCACGCACGG CACCGCGCCG
AAGTACGCCG GCAAGGACTA CGTCAACCCC GGTTCGCTGA TCCTGTCGGC CGAGATGATG
CTGCGCCACC TCGGCTGGAT CGAAGCCGCC GACCTCATCG TCGCGAGCAT GGAAAAGGCG
ATCGCGGCGA AGGCCGTCAC CTACGACTTC GCGCGACTCA TGGAAGGCGC GACCGAAGTC
AAGTGCTCGC AGTTCGCCGA GGCGATGGTC GCGAAGATGT GA
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| Protein sequence | MTYQHIQIPA AGQKITVNAD NTLNVPDTPI IPFIEGDGTG VDITPAMKKV VDAAVAKAYG
GRRQIAWMEV FAGEKAVKVY GGDQWLPEET VSAVRDYVIS IKGPLTTPTS GGIRSLNVAL
RQILDLYVCL RPVRYFAGVP SPVKAPEKVD MVIFRENTED IYAGVEWEAN SDEAKRVIKY
LQRQMGVKKI RFPATSAIGI KPVSIEGSER LIRKAIQYAI DNKRRSVTLV HKGNIMKFTE
GGFKKWGYEL AAREFGAKLI GEGPWMELPN GIVIKDVIAD AFLQQILLRP DEYDVIATLN
LNGDYISDAL AAEVGGIGIA PGANLSDTVA MFEATHGTAP KYAGKDYVNP GSLILSAEMM
LRHLGWIEAA DLIVASMEKA IAAKAVTYDF ARLMEGATEV KCSQFAEAMV AKM
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