| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0845 |
|---|
| Symbol | |
|---|
| ID | 3673542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 895031 |
|---|
| End bp | 895717 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637709523 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_314603 |
|---|
| Protein GI | 74316863 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.377436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.873186 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTCAA GCGCTTCCTC GTCGAACACG CCGGCTGAGC CGCACGGCAC GGGCACGGTG
CCGCGCGGGC AGTCTGCCGC CGGCGGCGCC TTCGCCGACC TGCTCGCGCG CGTCGCCGCC
TGCACCGCCT GCGCCGAACA TCTCCCGCAT CCACCGCGCC CCGTTCTGCG CGCCTCGCCG
AGCGCCCGGC TGCTGATCGT CGGGCAGGCG CCGGGCCGGC GCGTGCACGC CACCGGCATT
CCCTGGAACG ATCCGTCGGG CGACCGCCTG CGCGACTGGC TGGGCCTGAC GCGCGACGCG
TTCTACGATG CGTCGCGCAT CGCGATCGTC CCTGCGGGCC TGTGCTATCC CGGCACCGTC
GGCGGCAGCG ACCTGCCGCC GCGCGCCGAG TGCGCGTCGC GCTGGCAGCC GCCGCTGCGC
GCCGCGATGC CGAAGATCGG CCTCACGCTC CTGATCGGCG CCTACGCGCA GGCCTACTAC
CTCGGCCGGC AACGCCGCAC GACGCTCACC GAAACCGTCG AAGCCTGGCG CGACCTCGAT
CCCGCGCTTT TTCCGCTGCC GCATCCGAGC CCGCGCAATC GTCGCTGGTT CAAGCAACAC
CCGTGGTTCG ACGCCGAGGT CGTCCCGGCC CTGCGCGCGC GGGTTGGAGC GCTGCTGGGC
ACAGGCGATA ATGAGCCGGA CCAATAA
|
|---|
| Protein sequence | MRSSASSSNT PAEPHGTGTV PRGQSAAGGA FADLLARVAA CTACAEHLPH PPRPVLRASP
SARLLIVGQA PGRRVHATGI PWNDPSGDRL RDWLGLTRDA FYDASRIAIV PAGLCYPGTV
GGSDLPPRAE CASRWQPPLR AAMPKIGLTL LIGAYAQAYY LGRQRRTTLT ETVEAWRDLD
PALFPLPHPS PRNRRWFKQH PWFDAEVVPA LRARVGALLG TGDNEPDQ
|
|---|
| |