Gene Tbd_0844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0844 
Symbol 
ID3673541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp893626 
End bp895068 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content65% 
IMG OID637709522 
Productthreonine synthase 
Protein accessionYP_314602 
Protein GI74316862 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACC TCAGCACGCG GGGCCTCGCG CCGCAACTCC GCTTTTCCGA CATCCTGCTC 
GGCGGGCTGG CCGACGACGG CGGCCTCTAC GTGCCCGAGG CGTACCCGCG TTTCACGGCG
GCCGAGCTCG AGGCGATGCG GGCGATGAAC TACCGCGAAC TCGCGTTCGC GGTGCTGTCG
CGACTCGTCG ACGACATTCC GGCGGACGAC CTGCGCGCGC TGATCGACAA GACCTATACC
GCCGACGTCT ACCGCTATGT CGGCCGCGGC GAGAATGCTG CCGACATCAC GCCGCTCAAG
ACGCTGGAGC CCGGTCTGCA CGTGCTCGCG CTGTCGAACG GCCCGACGCT CGCGTTCAAG
GACATGGCGA TGCAGCTCCT CGGCAACCTG TTCGAGTACG TGCTCGGCAA GACCGGGGGC
GAACTCAACA TCGTCGGCGC GACCTCGGGC GACACGGGTT CGGCGGCCGA ATACGCCATG
CGCGGCAAGA AGGGCGTGCG CGTCTTCATG CTGTCGCCGG AGCATGGCAT GACGCGCTTC
CAGCAGGCGC AGATGTACGC GCTGCGCGAC GACAACATCC ACAACCTCGT GATTCGCGGC
GTCTTCGACC AATGCCAGGA CATGGTCAAG GCCGTGGCGA ACGACCTGCC GTTCAAGGCG
AAATACCATA TCGGCGCGGT CAACTCGATC AACTGGGCGC GCGTCGCGGC GCAGAGCGTC
TACTACTTCA AGGCGTATTT CGCGGCGACC CACAGCAACA CGCAAAGCGT TTCGTTCTCG
GTGCCGTCGG GCAATTTCGG CAACGTCTAT GCCGGGCACG TCGCGCGCCA GATGGGCCTG
CCGATCAACA AGCTGATCGT CGCGACCAAC GAGAACGACG TGCTCGACGA ATTCTTCAAG
ACCGGCGTCT ACCGTCCGCG CCCGGAGACA AAACACACGT CGAGCCCCTC GATGGATATT
TCCAAGGCAT CGAATTTCGA ACGCTTCGTC TTCGACCTGA GCGGCCGCGA CGTCGCGAAG
GTGCGCGACC TCTGGCGCGC GGTCGAGTCG GGCGGCAGCT TCGATCTCAA GACCCACGCC
GCGCCGGGCG GCGGCAGCTT GTTCGAGCGC ATCGCCGATT TCGGCATGGT CTCGGGTTCG
AGCAACCATG CCAACCGCAT CGACACGATC CGTACGGTCT ACGAGGTCTA CGGCACGATG
ATCGATCCAC ACACGGCCGA CGGCCTCAAG GTCGGGCTCG AGCACCGCGA GCCGGGCGTG
CCGCTCGTGT GCATGGAAAC GGCGCAGCCC GCCAAGTTCG AGGACGCGAT TCGCGAAGCG
CTCGGCATCG ACCCGGTCCG TCCGGCCGAG CTCGCCGACC TCGAAACCCA GCCGCAGAAG
AAGCACGTCA TGGACGCCGA CGTCGATGCG GTCAAGCGCT TCCTCGTCGA ACACGCCGGC
TGA
 
Protein sequence
MNYLSTRGLA PQLRFSDILL GGLADDGGLY VPEAYPRFTA AELEAMRAMN YRELAFAVLS 
RLVDDIPADD LRALIDKTYT ADVYRYVGRG ENAADITPLK TLEPGLHVLA LSNGPTLAFK
DMAMQLLGNL FEYVLGKTGG ELNIVGATSG DTGSAAEYAM RGKKGVRVFM LSPEHGMTRF
QQAQMYALRD DNIHNLVIRG VFDQCQDMVK AVANDLPFKA KYHIGAVNSI NWARVAAQSV
YYFKAYFAAT HSNTQSVSFS VPSGNFGNVY AGHVARQMGL PINKLIVATN ENDVLDEFFK
TGVYRPRPET KHTSSPSMDI SKASNFERFV FDLSGRDVAK VRDLWRAVES GGSFDLKTHA
APGGGSLFER IADFGMVSGS SNHANRIDTI RTVYEVYGTM IDPHTADGLK VGLEHREPGV
PLVCMETAQP AKFEDAIREA LGIDPVRPAE LADLETQPQK KHVMDADVDA VKRFLVEHAG