Gene Tbd_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0836 
Symbol 
ID3673533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp886713 
End bp887393 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content70% 
IMG OID637709514 
Productprotein-L-isoaspartate(D-aspartate) O-methyltransferase 
Protein accessionYP_314594 
Protein GI74316854 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.214261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.264106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAAA CCCTGAACCC GCGCGCCGGC ATCGGCATGA CCTCGGCGCG GACCCGCGGC 
CGCATGGTCG AGCGTCTGCG CGAGCAGGGC ATCAAGGACG AAATGGTGCT GGCGGCGATG
GGCATGGTCC CGCGTCACCT CTACGTCGAC CAGGCGCTCG AGTCGCGCGC CTACGAGGAC
ACGGCCCTGC CGATCGGCTT CGGCCAGACC ATATCCAATC CCTACATCGT CGCGCGCATG
GCCGAGCTCG CCCGCCACGG CGAAAACGGC AAGGGGCAGA CGCTCGGCCG CGTGCTCGAG
ATCGGCCTCG GCTGCGGCTA CCAGGCCGCG GTGCTCGGCA AGCTTGCGCG CGAGGTGGTG
TCGATCGAGC GCATCGCTGC GCTCGTCGGC AAGACGCGCG CCCGCCTGCG CGAACTGCGC
GTCAACAACG TCAAGCCGAA GCACGGCGAC GGCATGAACG GCGCCCGGGA TTTCGCGCCC
TTCGATGCCA TCGTGCTCGC GGCGGCCTTC GCCGAGGTCC CGCAGGCCTT GCTTGCGCAG
CTGGCCGATG GCGGCCGCCT GGTGATGCCG CTCGGCAACG CCACCCAGAC GCTGTGCCTG
ATCGAGCGTC AAGGCGAAGC CTTCGTCGAA CAGCGCCTCG AAGGGGTGAA ATTCGTGCCG
CTGCTGCCGG GGGTCGCGTG A
 
Protein sequence
MAETLNPRAG IGMTSARTRG RMVERLREQG IKDEMVLAAM GMVPRHLYVD QALESRAYED 
TALPIGFGQT ISNPYIVARM AELARHGENG KGQTLGRVLE IGLGCGYQAA VLGKLAREVV
SIERIAALVG KTRARLRELR VNNVKPKHGD GMNGARDFAP FDAIVLAAAF AEVPQALLAQ
LADGGRLVMP LGNATQTLCL IERQGEAFVE QRLEGVKFVP LLPGVA