Gene Tbd_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0816 
Symbol 
ID3673513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp858803 
End bp859588 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content56% 
IMG OID637709494 
Producthypothetical protein 
Protein accessionYP_314574 
Protein GI74316834 
COG category[K] Transcription 
COG ID[COG4271] Predicted nucleotide-binding protein containing TIR -like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.922606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATGG CACAAGTCGC AGTGGCACTC GCCAAGTTGG CAGGTATCCG CAAGGCGCTG 
GACCTGGCGC TAAATGATGA CCACAAAAAG GCTGGCCGAC TTCCAATCCA AAACTTCCTC
ATAGAGGAGG TTGGGCGCTA CTTCACCGGC GCGGCAACGC AACTTTCCAT ATTAAAAAAG
GAGTTGCCCG ATTTGTTTGG TGATTTTGTC GAGATGCCGG TTGAGCCGAA GACGGAGATG
GCCAAGACCT CAACCGAGGG CGCAGCCCAG TACCGCTATG CACGTAGTCA GTTGGAAGTG
CTGGCGCGCG ATATTGATCA GATTTTTGAG CTTCGCGCGA ACAGCGAGTT GGCGCCGCCC
TTGATCGCGG CTGCTACCAC CCGACGTGTC TTTATTAGCC ACGGCCGAGC ACCAGACTGG
CGCGAAGTTC AAGCATACGT CGAGAAGGAC ATTGGCTTGC CGACGTTGGA GCTTGCGCAG
GAGCCGAACC AAGGTCGAAC TATCTTGGCA AAGTTAATGG AAGCGTCGGG CCAGTGTGAT
AGTGCTGTGA TCGTGATGAC TGGTGACGAT CTGGATGCCG CCGGCCAGGC CCGTGCGCGC
GAGAACGTTA TCCACGAGAT CGGCTTCTTT CAGGGCAAAT ACGGGCTCGG CCGCGTCTGC
CTGCTCCATG AGGAGGGGGT TAGCATCCCG AGCAACATTC ACGGCTTGGT GTACACACCA
TTCCCCAAGG GAATGGTTTC GGCTTGCTTC GGCGTACTTA CCCGAGAACT AAAGGCGTTT
TATTGA
 
Protein sequence
MNMAQVAVAL AKLAGIRKAL DLALNDDHKK AGRLPIQNFL IEEVGRYFTG AATQLSILKK 
ELPDLFGDFV EMPVEPKTEM AKTSTEGAAQ YRYARSQLEV LARDIDQIFE LRANSELAPP
LIAAATTRRV FISHGRAPDW REVQAYVEKD IGLPTLELAQ EPNQGRTILA KLMEASGQCD
SAVIVMTGDD LDAAGQARAR ENVIHEIGFF QGKYGLGRVC LLHEEGVSIP SNIHGLVYTP
FPKGMVSACF GVLTRELKAF Y