Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0816 |
Symbol | |
ID | 3673513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 858803 |
End bp | 859588 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637709494 |
Product | hypothetical protein |
Protein accession | YP_314574 |
Protein GI | 74316834 |
COG category | [K] Transcription |
COG ID | [COG4271] Predicted nucleotide-binding protein containing TIR -like domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.922606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATATGG CACAAGTCGC AGTGGCACTC GCCAAGTTGG CAGGTATCCG CAAGGCGCTG GACCTGGCGC TAAATGATGA CCACAAAAAG GCTGGCCGAC TTCCAATCCA AAACTTCCTC ATAGAGGAGG TTGGGCGCTA CTTCACCGGC GCGGCAACGC AACTTTCCAT ATTAAAAAAG GAGTTGCCCG ATTTGTTTGG TGATTTTGTC GAGATGCCGG TTGAGCCGAA GACGGAGATG GCCAAGACCT CAACCGAGGG CGCAGCCCAG TACCGCTATG CACGTAGTCA GTTGGAAGTG CTGGCGCGCG ATATTGATCA GATTTTTGAG CTTCGCGCGA ACAGCGAGTT GGCGCCGCCC TTGATCGCGG CTGCTACCAC CCGACGTGTC TTTATTAGCC ACGGCCGAGC ACCAGACTGG CGCGAAGTTC AAGCATACGT CGAGAAGGAC ATTGGCTTGC CGACGTTGGA GCTTGCGCAG GAGCCGAACC AAGGTCGAAC TATCTTGGCA AAGTTAATGG AAGCGTCGGG CCAGTGTGAT AGTGCTGTGA TCGTGATGAC TGGTGACGAT CTGGATGCCG CCGGCCAGGC CCGTGCGCGC GAGAACGTTA TCCACGAGAT CGGCTTCTTT CAGGGCAAAT ACGGGCTCGG CCGCGTCTGC CTGCTCCATG AGGAGGGGGT TAGCATCCCG AGCAACATTC ACGGCTTGGT GTACACACCA TTCCCCAAGG GAATGGTTTC GGCTTGCTTC GGCGTACTTA CCCGAGAACT AAAGGCGTTT TATTGA
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Protein sequence | MNMAQVAVAL AKLAGIRKAL DLALNDDHKK AGRLPIQNFL IEEVGRYFTG AATQLSILKK ELPDLFGDFV EMPVEPKTEM AKTSTEGAAQ YRYARSQLEV LARDIDQIFE LRANSELAPP LIAAATTRRV FISHGRAPDW REVQAYVEKD IGLPTLELAQ EPNQGRTILA KLMEASGQCD SAVIVMTGDD LDAAGQARAR ENVIHEIGFF QGKYGLGRVC LLHEEGVSIP SNIHGLVYTP FPKGMVSACF GVLTRELKAF Y
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