| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0791 |
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| Symbol | |
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| ID | 3673488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 833188 |
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| End bp | 834372 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637709469 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_314549 |
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| Protein GI | 74316809 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.216291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCGCC GCGTTCTCAC CGTCCTTGGC GCGACCGGGA CGATAGGCGT CAATACGCTC
GACGTCGTTT CACGCCACCC CGAACGCTTC GAGATCTTCG CGCTCACGGG CGCGACCCAG
GTCGAACGCA TGTTTGAGCA GTGCCGCGCG CACCGGCCGC GCTTCGCCGT CATGAGCGAG
CCGGCCGCGG CGGCGGCGTT GCGCGCGCGA CTTGCGGCCG ACGGCCTTGC GGTCGAGGTG
CTCGAAGGCG CGGCCGCGCT GACAGAGGTC GCGATCGCGG CCGAAGTCGA TACCGTCATG
GCGGCGATCG TCGGCGCCGC CGGTCTGCCG GCGACGCTCG CGGCGGCGCG CGCGGGCAAG
CGCATCCTGC TCGCCAACAA GGAAACCCTC GTCGTCTCGG GCCAGCTTTT CATGGACGCG
GTCGCCGCCA GCGGCGCCGA ACTCCTGCCG ATCGATTCGG AACACAACGC GATCTTCCAG
GCCTTGCCGC GCGGATTCGA CGGTGATTTC CAGCGCGCCG GCGTCAATAC GCTGTGGCTC
ACCGCCTCCG GCGGCCCCTT CCGCACGCTG TCGGCCGAGG CCATCGCGGC GGCGACACCC
GAGCAGGCAG TGGCGCATCC GAACTGGGTC ATGGGCAGAA AGATCTCGGT CGATTCGGCG
AGCCTCATGA ACAAGGGGCT CGAAGTGATC GAGGCGCGCT GGCTGTTCAA CGCGCGTCCC
GAGCAGATCA AGGTACTCGT GCACCCGCAG AGCATCGTGC ATTCGATGGT CGAATACGTC
GACGGCTCGG TGGTCGCGCA AATGGGCACG CCCGACATGC GCACGCCGAT CGCGTACGCA
CTCGGCTTTC CCGAACGGAT CGCCGCCGGC GTGCCGATGC TCGAACTCAT GGGCAGGCAG
CTCACGTTCG AAGCGCCCGA CACGGTGCGC TTTCCCTGTC TGCAGCTCGC CTTCGACGCG
CTCGCGGCCG GCGGCAACGC CGCTGCCGTG CTGAACGCGG CCAACGAGGT CGCGGTCGCA
CGGTTTCTCG AAGGCGCGAT CTCGTTTGGC GGCATCGCCG CGAGCATCGC CCACGCCCTC
GATGCGGTGG CCGGGGGGCG CGCCGACACG CTCGACGAGC TGCTCGACGC CGACCACCGG
GCGCGTCGCG TCGCCGACGA CTATCTCAGG TGCAGCTACG CATGA
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| Protein sequence | MRRRVLTVLG ATGTIGVNTL DVVSRHPERF EIFALTGATQ VERMFEQCRA HRPRFAVMSE
PAAAAALRAR LAADGLAVEV LEGAAALTEV AIAAEVDTVM AAIVGAAGLP ATLAAARAGK
RILLANKETL VVSGQLFMDA VAASGAELLP IDSEHNAIFQ ALPRGFDGDF QRAGVNTLWL
TASGGPFRTL SAEAIAAATP EQAVAHPNWV MGRKISVDSA SLMNKGLEVI EARWLFNARP
EQIKVLVHPQ SIVHSMVEYV DGSVVAQMGT PDMRTPIAYA LGFPERIAAG VPMLELMGRQ
LTFEAPDTVR FPCLQLAFDA LAAGGNAAAV LNAANEVAVA RFLEGAISFG GIAASIAHAL
DAVAGGRADT LDELLDADHR ARRVADDYLR CSYA
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