| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0790 |
|---|
| Symbol | |
|---|
| ID | 3673487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 832385 |
|---|
| End bp | 833191 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637709468 |
|---|
| Product | phosphatidate cytidylyltransferase |
|---|
| Protein accession | YP_314548 |
|---|
| Protein GI | 74316808 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0575] CDP-diglyceride synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.203528 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCCC TGGCACGACG CGTGTCCACG GCGCTGCTGT TGCTGGCCGT ATTCGTACCG
GCCGCCCTGT GGGCGCCGGC CTGGCTGTGG GCGCTCTTGA TGGCCGTCGT GGTCGGCGCG
GCCGCCTACG AGTGGGCGCG CATCAGCCAA TTCCCCGGTC CGATGGCCGG TTTTTACGCG
GGCGCGCTCG CCCTCGTCGC CGCCGCCTTG CCCTACGTGC TCGGTAACGG CTGGCCGGCT
TTCCAGGGCG GACTCTTCGC CCTCGCCGCT GCCTTCTGGC TCGTCGTCGC GCCGCTGTGG
CTGCTCGGAA GCTGGCGTGC ATCGGCCGCG TTCGTGCGCG CCGCGGTCGG CGTCGTCCTG
CTCGTCCCCA CCGGGGCCGC GCTGCTCTAC CTGCAGGCGC GCGGCCCCGC CGTTTTGCTC
GGCGTGATCG CGATCGTGTG GATCGCCGAC ACGGCCGCGT ATTTTTTCGG CCGTCGCTTC
GGCCGTCACA AGCTGGCGCC GCGCATCAGT CCCGGCAAAA CCTGGGAGGG CGCGATCGGC
GCGCTGGCGG CCGTCGTCGT CTACGCGGCG GCATTGAGCG TGGCGGTCGG CATGCCGCTC
GTGTCGCTCG TCATCATGGC GGCCGGCCTG CTTTATGTGT CGGTGCTGGG TGACCTGTTC
GAATCGTGGA TCAAGCGCGT CGCCGGCATG AAGGACAGCG GCAACCTGCT GCCCGGTCAC
GGCGGCGTGC TCGACCGCAT CGATGCGCTG ACCTCGACGC TGCCCGTCGC TGCGGGACTC
CTGATGTGGC TGGAGCACGG CGCGTGA
|
|---|
| Protein sequence | MTPLARRVST ALLLLAVFVP AALWAPAWLW ALLMAVVVGA AAYEWARISQ FPGPMAGFYA
GALALVAAAL PYVLGNGWPA FQGGLFALAA AFWLVVAPLW LLGSWRASAA FVRAAVGVVL
LVPTGAALLY LQARGPAVLL GVIAIVWIAD TAAYFFGRRF GRHKLAPRIS PGKTWEGAIG
ALAAVVVYAA ALSVAVGMPL VSLVIMAAGL LYVSVLGDLF ESWIKRVAGM KDSGNLLPGH
GGVLDRIDAL TSTLPVAAGL LMWLEHGA
|
|---|
| |