| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0789 |
|---|
| Symbol | |
|---|
| ID | 3673486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 831628 |
|---|
| End bp | 832365 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637709467 |
|---|
| Product | undecaprenyl pyrophosphate synthetase |
|---|
| Protein accession | YP_314547 |
|---|
| Protein GI | 74316807 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.972359 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.122515 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTACCC GCACCAAGCA GGCGATCCCC GTGACCTCGG ACGTGCCGCG GCACATTGCC
ATCATCATGG ACGGCAACGG GCGATGGGCG AAGCGCCGCT TCATGCCGCG CTTCGCCGGA
CATCGCAAGG GAGTCGAGGC GCTGCGCGGC GTGATCCGCG CCTGCGCCGA GCGTGGCGTG
ACGCATCTGA CCGTGTTCGC CTTCAGCTCG GAAAACTGGC GGCGCCCGCA GGAAGAAGTG
ACGCTGCTGA TGGAGCTGTT CCTGCGCGCG CTCGAGAACG AAGTGGCCAA GCTGCACGAG
AACGGCATTC GTTTTCGCGT CATCGGCGAC CTGTCGGGAT TTTCCGAACG CATCCAGACG
TTGATCCGCG AGGCCGAAAC GCTGACACGG GACAACAGCC GCCTCACGTT CACGGTCGCC
GCGAATTACG GCGGACGCTG GGACGTCGTG CAGGCCGTCA AGAAACTCGT CGCGTCGGGC
GAACCGGTGA GCGAAGCGGC GCTGGCCGCG CACCTGAGCC TCGCCGATAC ACCCGAGCCC
GATCTCTTCA TCCGCACCGG CGGGGAGCAA CGCATCAGCA ATTTCCTGCT GTGGCAGCTT
GCCTACACTG AACTCTACTT TACCGACGCC CTCTGGCCCG ACTTCGACGC CGCGGCGCTC
GACGCCGCGA TCGCTTCGTA TCGCACGCGC GAACGTCGAT TCGGTCGCAC CAGCGAACAG
CTGCTGACGG CGTCGTGA
|
|---|
| Protein sequence | MSTRTKQAIP VTSDVPRHIA IIMDGNGRWA KRRFMPRFAG HRKGVEALRG VIRACAERGV
THLTVFAFSS ENWRRPQEEV TLLMELFLRA LENEVAKLHE NGIRFRVIGD LSGFSERIQT
LIREAETLTR DNSRLTFTVA ANYGGRWDVV QAVKKLVASG EPVSEAALAA HLSLADTPEP
DLFIRTGGEQ RISNFLLWQL AYTELYFTDA LWPDFDAAAL DAAIASYRTR ERRFGRTSEQ
LLTAS
|
|---|
| |