Gene Tbd_0785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0785 
Symbol 
ID3673482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp828576 
End bp829322 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content64% 
IMG OID637709463 
ProductSSU ribosomal protein S2P 
Protein accessionYP_314543 
Protein GI74316803 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.121352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCA CCATGCGCCA AATGCTGGAG GCCGGTGTCC ATTTCGGTCA CCAGACCCGC 
TTCTGGAACC CCCGGATGGC CCCGTTCATT TTCGGCCATC GCAACAAGAT CCATATCGTC
AACCTGGAAA AATCGCTGCC GATGTTCCAG GAGGCGCAAA AATTCGTGCG TCAGCTCTCG
GCCAACAAGG GCAACGTGCT GTTCGTCGGC ACCAAGCGCG CCGCGCGCGA CATCGTGCGT
GAGGAAGCGC AGCGCGCCGG CATGCCCTAC GTCGACCAGC GCTGGCTCGG CGGCATGCTG
ACCAACTTCA AGACCGTCAA GCAGTCGATC AAGCGCCTGA ACGACCTCGA GGCGCAGATC
GCCGAGCCGG GCCGCCTGTC GAAGAAGGAA ATCCTCACGG TCCAGCGCGA AGTCGACAAG
CTCAACCGCA GCCTCGGCGG CATCCGCGAA ATGGGCGGGC TGCCCGACGC GCTCTTCATC
ATCGACGTCG GCTACCAGAA GGGAGCCGTG GTCGAGGCCA AGAAGCTCGG CATCCCGGTG
ATCGGCGTCG TCGACACCAA TAACAGCCCC GAAGGCGTCG ACTACGTGAT CCCCGGCAAC
GACGACTCGG CCCGCGCGAT CCGTCTCTAC GCCCGCGGCA TGGCCGACGC GGCGCTCGAA
GGCCGCGCCC AGGTGATCAG CGAGATCGTC GGCGGCGAGG AATTCGTCGA GGTCGAGGAA
GAAGAGGGTG GTGTCGCCGC CGAGTAA
 
Protein sequence
MSVTMRQMLE AGVHFGHQTR FWNPRMAPFI FGHRNKIHIV NLEKSLPMFQ EAQKFVRQLS 
ANKGNVLFVG TKRAARDIVR EEAQRAGMPY VDQRWLGGML TNFKTVKQSI KRLNDLEAQI
AEPGRLSKKE ILTVQREVDK LNRSLGGIRE MGGLPDALFI IDVGYQKGAV VEAKKLGIPV
IGVVDTNNSP EGVDYVIPGN DDSARAIRLY ARGMADAALE GRAQVISEIV GGEEFVEVEE
EEGGVAAE