| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0780 |
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| Symbol | def |
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| ID | 3673974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 823656 |
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| End bp | 824189 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637709458 |
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| Product | peptide deformylase |
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| Protein accession | YP_314538 |
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| Protein GI | 74316798 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.667825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.561124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGTCC GCGAAGTCCT GAAAATGGGA GACCCCCGGC TGCTCGCGCC GGCCCGCGCG
GTCGAGCGTT TCGCCACCGC GGAACTCGCG CAGCTCGTCG CCGACATGCA CGACACCATG
CGCGCGCTGA ACGGCGCGGG CCTCGCCGCG CCGCAGATCG GCGTGTCGCT GCAGGTCGTG
ATCTTCGAGG TGAACGCCAA CCCGCGCTAC CCCGACGCCG CCGAGGTTCC GTTGACCGTT
CTGGTCAACC CGGTGGTCAC GCCGCTCTCC GACGCGACCG AGGAAGGCTG GGAGGGCTGC
CTGTCGGTAC CCGGCATGCG TGGACTGGTG CCGCGCCACG GCGAAATCCA CTATCGCGGG
TTCGACGCGG CCGGGCGTGC GCTCGAGCGC CGGGTGAGCG GTTTTCACGC CCGCGTCGTG
CAGCACGAAG TCGACCACCT GAATGGCATC CTGTATCCGA TGCGGATCCC GGACCTGCGC
AATTTCGGTT TTACCGACAC CCTGTTTCCC GGGCAGACGC TGCAGGACGA CTGA
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| Protein sequence | MAVREVLKMG DPRLLAPARA VERFATAELA QLVADMHDTM RALNGAGLAA PQIGVSLQVV
IFEVNANPRY PDAAEVPLTV LVNPVVTPLS DATEEGWEGC LSVPGMRGLV PRHGEIHYRG
FDAAGRALER RVSGFHARVV QHEVDHLNGI LYPMRIPDLR NFGFTDTLFP GQTLQDD
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