Gene Tbd_0776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0776 
Symbol 
ID3673970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp820966 
End bp821517 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content69% 
IMG OID637709454 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_314534 
Protein GI74316794 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.552898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.38837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTT CCGCACCCGA CATGCCCGAC GCGCTGGGCT GGTTGCCCGC TGCACGCCGG 
GTCCCCTCGC CCAATTGCGA CCCGCGTCCG CCGGGAACGG CCGTCGAACT GATCGTCATC
CACAACATTT CGCTGCCGCC CGGCGTCTTC GCCGGCGACG CCGTGATCGA GCTCTTCACC
AACCGCCTCG ACTGGGACGC CGATCCCTAT TACCAGGCGA TGCGCGGGCT CAGGGTCTCC
GCCCATTTCT TCATCCGCCG CGACGGCAGC CTGCTGCAAT TCGTGCCATG CACGCTGCGC
GCCTGGCACG CGGGCGCATC GAACTGGCAG GGGCGCGAAC GCTGCAACGA TTTCTCGATC
GGCATCGAAC TCGAAGGCAG CGACGACGTG CCTTTCGACG ACGCGCAGTA CGCGACCCTG
CGCCGGCTCG TCGACGTGCT GAAGGCCGCC TATCCGATCC AGGGCGTCGC CGGCCACAGC
GACATCGCGC CCGGCCGCAA GAGCGACCCC GGCCCGCATT TCGCCTGGCA CCGCCTCGAC
GCGACAGCCT GA
 
Protein sequence
MPISAPDMPD ALGWLPAARR VPSPNCDPRP PGTAVELIVI HNISLPPGVF AGDAVIELFT 
NRLDWDADPY YQAMRGLRVS AHFFIRRDGS LLQFVPCTLR AWHAGASNWQ GRERCNDFSI
GIELEGSDDV PFDDAQYATL RRLVDVLKAA YPIQGVAGHS DIAPGRKSDP GPHFAWHRLD
ATA