| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0732 |
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| Symbol | |
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| ID | 3673823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 774818 |
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| End bp | 776248 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637709410 |
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| Product | RNA polymease sigma-54 factor protein |
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| Protein accession | YP_314490 |
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| Protein GI | 74316750 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.126089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTC CCGCCCTCGC CCTCGAGCCG CGCCAGACGC AGACCCTGAC GCCGCGGCTG
CAACAGGCGG TGCGGCTGCT GCAGCTTTCG ACCTTCGATT TCGCGCTTGA GCTGCAGGAG
CTCGTCAGCA GCAACCCGTT CCTCGAACTC GAGGATGGCG AGTTCGCCGA CGAAGACGCG
GCCGCACCGG ACACCGCCAC GACCGCGGCC GACACGCCCC CGGCAGCCGA CGGGGCGCAG
GCGGAAGACT ATGCCGAGAC CGCTTACGAG GAGCGGCTCG GCGACGGCGG CGAGGCGCCG
GGGCGGTACA GCGAGGCGAA TGCCGACGCG ATCGACTTCG CCTGCGCGCC GGTCACGCTG
CGCCAGCACG TGCACAGCCA GCTCAACATG CTCGACCTGC CGCCGCGCGA GCACTTTCTC
GCCTGGATCA TCGCCGAGGC GCTCGACGAC GACGGCTACC TGCGCGTCGA ACTCGACGCC
TTGCGCGCGA TGGCGGGGCT CGAACCGCGT GTCGACGCGC GCGAGATGCT CGCGGCGCTC
ACGCGCGTGC AATCCCTGGA CCCGGCGGGC CTCGCGGCCC GCGACGTCCC CGAGTGCCTG
ACCCTGCAGT TGCGGCGTCG GCCGCCGTCG CCGCAACGCG AGCTCGCGCT GCGCATCGTG
CGCGACGAAC TCAAGCTGCT GCAGCAGCGC GACCTGCAGC GCATCGCCCA GCGCGTCGGC
AGCACTCCCG CGGAAGTGGA GGCCGTGTGC GCCTACATCC GCCGCCTCGA GCCGCGGCCC
GGCGCGTGCT TCGGCCACCA CGTCGCCGCG GCCATCCGCC CCGACGTGAT CGTGCGCAAG
ATTCGCGGGC AGTGGACGGC CCTGCTGAAC AGTTCGGCGG TTCCGCGCGT CAGCCTCAAC
CGCACCTACG CCGAGCTGTT CCAACGCCAC CGCGAGCCGC ACCACGGCGA CCTCGCCGGC
CACCTGCGCG AAGCGCGCTG GGCGGTGCAG AACATGGAGC AGCGCTTCTC GACGATCCTG
CGCGTGGCGC AGGCCCTGGT CGACCGCCAG CAGCATTTCT TCGAGCACGG CACGCTCGCC
ATGCAGCCGC TCGGCCTCAA GGACATCGCC GACGAACTGG GCCTGCACGA GTCGACCGTC
TCGCGCGCGA CCTGCAACAA ATTCATGGTG ACGCCGCTGG GCGTGTTCGA ACTGAAGTAT
TTCTTCTCGC GCGCGCTGAA CACCGAACAG GGCAGTCAGT GCTCGACCAC GGCGATCCGC
GAGGCGATCC GCAAGATGAT TCTTTCGGAG GATGCCCGCT CGCCGCACTC GGACGCCGAC
ATCGCGCGCA TCCTGATGCA GCAGGGCCTG CGCGTCGCGC GGCGCACGGT CACCAAGTAC
CGCCAGATGA TGGCGATCCC CAACGTCGAC ATGCGCCGCT ACCACGGCTG A
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| Protein sequence | MNRPALALEP RQTQTLTPRL QQAVRLLQLS TFDFALELQE LVSSNPFLEL EDGEFADEDA
AAPDTATTAA DTPPAADGAQ AEDYAETAYE ERLGDGGEAP GRYSEANADA IDFACAPVTL
RQHVHSQLNM LDLPPREHFL AWIIAEALDD DGYLRVELDA LRAMAGLEPR VDAREMLAAL
TRVQSLDPAG LAARDVPECL TLQLRRRPPS PQRELALRIV RDELKLLQQR DLQRIAQRVG
STPAEVEAVC AYIRRLEPRP GACFGHHVAA AIRPDVIVRK IRGQWTALLN SSAVPRVSLN
RTYAELFQRH REPHHGDLAG HLREARWAVQ NMEQRFSTIL RVAQALVDRQ QHFFEHGTLA
MQPLGLKDIA DELGLHESTV SRATCNKFMV TPLGVFELKY FFSRALNTEQ GSQCSTTAIR
EAIRKMILSE DARSPHSDAD IARILMQQGL RVARRTVTKY RQMMAIPNVD MRRYHG
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