Gene Tbd_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0726 
Symbol 
ID3673817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp768674 
End bp769615 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content74% 
IMG OID637709404 
Productcation efflux protein 
Protein accessionYP_314484 
Protein GI74316744 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.951048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCGC ATAAGCACGA CCACGCCGGC CACACGCACT TTCACGGCGC GCACGCGGGC 
GGGAGCCGCA CGCTGCTCGT CGCGCTACTG CTGACGCTCG CGTTCGCCGG CATCGAGGCC
GCGGCGGGCC TGTGGTCGGG CTCGCTCGCG CTGCTCTCCG ACGCCGCGCA CATGGTCGCC
GACAGTTCGG CGCTCGGACT CGCCGCGGCA GCGGCCTGGC TCGCGCGGCG CCCGCCGAGC
ATGCGCCACT CCTACGGCCT CGTGCGCGCC GAGGTGCTCG CGGCGCTGCT CAACAGCCTG
CTCGTGCTCG TGCTGGTCGG CTTCATCGTG CACGAAGCGC TCGAACGCAT CGGCAGCCCG
CGCGACGTCG CCGGCGGCGC CGTCATCGGC GTCGCCGTAA TCGGTCTCGC GGTCAACCTG
ACGGTCGCCT GGGTGCTCTC GCGCGGCGCG CACAGCCTCA ACAGCCGCGC CGCCCTGCTC
CACGTGCTCG GCGACGCGCT CGGCTCGGTC GCGGCGATCG CCGCCGGCAT CGTCGTCGTC
ACGACCGGCT GGACGCCGAT CGACCCGCTG CTGTCGATCC TCGTCGCCGT CTTGATCCTC
GTCTCCGCGC TGCGGCTGCT GCGCGAGGTC GTCCACGTGC TGATGGAAGG CGTGCCGCTC
GACGTCGAAC TCGAAGCGGT CGGCCGCGAC CTCGCCGCGC TCGACGGCGT GCTGCGCGTT
CACGACCTGC ACGTGTGGAC CCTCTCGACC GGCACCGTGG CGCTCTCGGC CCACCTGGAA
CTGCGCGACC TCGCCGACTG GCCGGGCATT CTCGCGGCCG CGCGCAGGGA CATGGACGCG
CGGCACGGCA TCCGCCACGT CACGCTGCAA CCCGAGACGC TCGCCGCGCT GCCCCTGCAG
CGCGCGGAAT GGCCGCCGCG GGAAAGCCGC CCGCACGGCT GA
 
Protein sequence
MAAHKHDHAG HTHFHGAHAG GSRTLLVALL LTLAFAGIEA AAGLWSGSLA LLSDAAHMVA 
DSSALGLAAA AAWLARRPPS MRHSYGLVRA EVLAALLNSL LVLVLVGFIV HEALERIGSP
RDVAGGAVIG VAVIGLAVNL TVAWVLSRGA HSLNSRAALL HVLGDALGSV AAIAAGIVVV
TTGWTPIDPL LSILVAVLIL VSALRLLREV VHVLMEGVPL DVELEAVGRD LAALDGVLRV
HDLHVWTLST GTVALSAHLE LRDLADWPGI LAAARRDMDA RHGIRHVTLQ PETLAALPLQ
RAEWPPRESR PHG