Gene Tbd_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0712 
Symbol 
ID3673803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp750423 
End bp751175 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content67% 
IMG OID637709390 
ProductMotA/TolQ/ExbB proton channel family protein 
Protein accessionYP_314470 
Protein GI74316730 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0154333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACCG CCGCCCCCAC CCAACTGGGC TTCGCCCACT TCATCGCCCA GGCCGACGGG 
CTCGCGCATT TCCTGCTCGT CGTGCTGCTC GCGATGTCGG TCGTCACCTG GACGCTCATC
GTCGCCAAAA GCGTCGGCAA CTGGCGCATG AAGCAACACG CACGGGCCTT CCTCGCGCAC
TTCTGGAATG CCCCCGGCCT GCCCGCGGTC GCCGACCATC TGCAGAAGCA CGGCGTCAAG
GATCCGTTCT CGCACCTGAC CCATCACGGC CTCAAGGCCG CCGAGCAGTA CCGCAACCGC
TCGGGCCAGC GCCTGATCGA GTCGGGCTCG GAAGACGAAT TCCTGACCCG CGCGCTGCGC
CGTGCGATCA ATCAGGACAC GGCGCGTCTC GAATACGGCC ACACCATGCT CGCGTCGATC
GCGTCCTCCG CGCCCTTCGT CGGCCTGTTC GGCACGGTCT GGGGCATCTA CCACGCCCTG
GTCAACATCG GCATGTCGGG CTCGGGCAGC CTCGACCAGG TCGCCGGGCC AGTCGGCGAG
GCACTGATCA TGACCGCGCT CGGCCTCGCG GTCGCGATCC CCGCCGTGCT CGCGTACAAC
TTCTTCAATC GCGCCCGCCG CGAGATGCTG TCCGAGGTCG ACGGCTTCGC GCACGACCTC
TTCGCCTTCA TGTCGACCGG CGTGCGCAGC GATACGCGGA TCGAAAAGGA CGCGCCGCAG
ATCTACGCAG CGCCCGTCGC AAGGAGCGTG TGA
 
Protein sequence
MPTAAPTQLG FAHFIAQADG LAHFLLVVLL AMSVVTWTLI VAKSVGNWRM KQHARAFLAH 
FWNAPGLPAV ADHLQKHGVK DPFSHLTHHG LKAAEQYRNR SGQRLIESGS EDEFLTRALR
RAINQDTARL EYGHTMLASI ASSAPFVGLF GTVWGIYHAL VNIGMSGSGS LDQVAGPVGE
ALIMTALGLA VAIPAVLAYN FFNRARREML SEVDGFAHDL FAFMSTGVRS DTRIEKDAPQ
IYAAPVARSV