| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0684 |
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| Symbol | |
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| ID | 3672649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 724165 |
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| End bp | 726654 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637709356 |
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| Product | hypothetical protein |
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| Protein accession | YP_314442 |
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| Protein GI | 74316702 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.852275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.517784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCC TTCGGCTCGG GCTGTGGATG CTGCGCCGCG AGGGCAGGCA GAAAGGCTTC
GCCGCCAGCG GCGAGTGGCG CGTGTTGCTG CTCGCCCTGG TCATCGGCGT CGGCAGCGTG
TCGACGACGG GCTTCCTCGG CGACCGCCTG AAGCGCGCGA TGAACGAGCA GGGCGCGAGC
TTTCTCGGCG CCGACCTGCT CGTCACGAGC CCGCGTCGCA TCGAGGCGTG GCCGGACCAC
GCGCTTCGTC GTTCGGCCGC GCTCGATTTC ACGAGCATGG TCAGCCGCGG CGACGCGTTC
CAGCTCGCCG CCGTGCGCGC CGTCGACGCA CGCTACCCGC TGCGCGGCAG CGTGCGGATC
GCCGAACGCG CCTTCGCGCC AGGCAACGCC CGCCCCGCGC TACCGCCCCG GGGCGCCGTG
TTCGTCGATC AGGCGCTGTT GCCGCTCCTC GACGCGCAAG TCGGCGATCG CGTCCGCATC
GGCGAAGCCG AATTTCGCAT CGCCGGCGTC GTGGTCGAAG AGCCGGGCCA GCTCGGCGGC
GTGTTCGGAC TCGCGCCGCG CGTGTTCCTG CGCTCCGACG AACTCGCGCA AACGCGCATC
GTGCAGCCGG GAAGCCGCGT CACCCACGTC TATCAGTTCG CCGGCGAACC CGCGGCGCTC
GCGGCCTTCG CCCGCGCGCT CAAGCCGCGC CTCGACAGCA CCCAGCGCCT GATCGGTTCG
CGTGAAGGCG TCGAGACGCT GCGCGGCGCG TTCGCGAACG CCGATCGCTA CATCCAGCTC
ACGGCGCTGA TCAGCCTGCT GCTATCGGTG GCGGCGATCG CGATCGCCGC GCGCCGCCAC
GCGCTGCGCC ACTACGACCA GGCCGCGCTG CTGCGCTGCC TCGGTGCGAC GACCCGGCAG
CTGCGCGTGC TATACGTCAC GCAATTGCTC GTGCTCGGAC TGCTGGGCAG CCTCCTCGGC
GTTGCAATCG GCGCGCTCAT GCAGCAGGCG CTTGCCGGAA TGCTGCTGCC GGACGCCGTC
ACCCGCCTGC CGGCGCTCGG CTGGGCGCCG GTCGGCGCGG CCATCGCGAG CGGGCTGCTC
GCGCTGGCCG GCGCCAGCCT GCCCGCGCTC GTGCGCCTGA TCCGGGTGCC GCCGCTGCGC
GTGTTGCGGC GCGACCTGCC GCCGCTGCCG CTGTCGGCGT GGATCAGCGC GACGACCAGC
GTGGGCGCGC TGCTCGTGCT GATCGCCTGC TACGCGGGCG ACGCCCGGCT CGTCGGCGTT
TTCGTTGCGG CGCTCGCCGC ACTGGCCGGC GTGCTTGCCT TGCTGGCGCG TCTCGCTCTG
CTCGCCGGCC GCGGCGTCCA GCTTCTCGCC CAGGGCCCCT TGCGCTTTGG CCTGGCGCAA
CTCCTGCGTC ATCGTTTCGA CAGCAGCCTG CAACTCGGCG CCTTCACGCT CGCGCTGTTT
CTGGTCGCGC TGCTGGCGCT CGTGCGCAGC GACCTCGTCG CCGGCTGGCG CGCGCAATTG
CCGCCGCAGG CGCCGAATTA CTTCCTCGTG AACATCCCGC CGCACGAGCA GGACGCCGTA
GCGTCCTACC TCGCCGCGCA TGACCTGCGG GCGTCGACGA TCTATCCGAT GGTACGCGGC
CGGCTGGTCA CGAAAAACGG CGCGCCCATC GCCGAGACGC TGCCTCCCGA AGCGCGCAGC
AGCAACACGC TGCGGCGCGA ACTCAACCTG ACCTGGACCG CGGCGCTGCC CGCGAACAAC
GAGGTGCTCG ACGGGCGCTG GCACGGCGAG CGGCGCGGCG CAGAGATCTC GGTCGAGTCG
GGGATGGCCG AGCGCCTGCA ACTCGCGCTC GGCGACGCGC TCGGTTTCCA GATCGGTGAC
CAGACGCTGG CGGCACGCAT CACGAGCATC CGCAGCGTGA AATGGGATTC GATGCAGCCC
AACTTCTTCG TGATTTTCGC GCCTGGCCAG CTCGACGCCT TCCCGGCGAG TTCGATCGCG
AGCGTCTACG TCTCGCCCCC GGCGAAGCAG GCTCTGCCGG GCTTCGTCAA ATCCTTTCCC
GGCGTCACGG TGCTCGCGCT CGACAAGCTC ATCGCGAATA TCGAGGCCGT CTTCGCGCAG
ATCATCGGCG CGATCCAACT CTTGTTGGGG TTTCTGCTCG CCGCCGGCAT GGCGGTCGTC
GTCGCGACGC TCCTCGCGAG TCTCGATGCC CGGCAGCAGG AAGCGGTGCT CTTGCGCACG
CTCGGCGCCG AGCGCGCCTA TCTGGCGAAG GCGCTGTGGA GCGAGTTCAT CGTGCTCGGC
GTGCTCGCGG GCCTGCTCGC GAGCGCCTGC GCCGAGGCCG CGATGGCGCT GATCGGGGAC
CGCCTGTTCG AGCTGCCGCC GCGCCTGCAC CCCTGGCTCT GGCTCGTGCT CCCGGCCGCC
GGCGCGCTGC TCGTCGGCGC GAGCGGCTGG CTGACCACGC GCCACATCAC GCGCCTGCCG
CCGATGCAGT CGATACGCGA ACTCGCCTGA
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| Protein sequence | MNFLRLGLWM LRREGRQKGF AASGEWRVLL LALVIGVGSV STTGFLGDRL KRAMNEQGAS
FLGADLLVTS PRRIEAWPDH ALRRSAALDF TSMVSRGDAF QLAAVRAVDA RYPLRGSVRI
AERAFAPGNA RPALPPRGAV FVDQALLPLL DAQVGDRVRI GEAEFRIAGV VVEEPGQLGG
VFGLAPRVFL RSDELAQTRI VQPGSRVTHV YQFAGEPAAL AAFARALKPR LDSTQRLIGS
REGVETLRGA FANADRYIQL TALISLLLSV AAIAIAARRH ALRHYDQAAL LRCLGATTRQ
LRVLYVTQLL VLGLLGSLLG VAIGALMQQA LAGMLLPDAV TRLPALGWAP VGAAIASGLL
ALAGASLPAL VRLIRVPPLR VLRRDLPPLP LSAWISATTS VGALLVLIAC YAGDARLVGV
FVAALAALAG VLALLARLAL LAGRGVQLLA QGPLRFGLAQ LLRHRFDSSL QLGAFTLALF
LVALLALVRS DLVAGWRAQL PPQAPNYFLV NIPPHEQDAV ASYLAAHDLR ASTIYPMVRG
RLVTKNGAPI AETLPPEARS SNTLRRELNL TWTAALPANN EVLDGRWHGE RRGAEISVES
GMAERLQLAL GDALGFQIGD QTLAARITSI RSVKWDSMQP NFFVIFAPGQ LDAFPASSIA
SVYVSPPAKQ ALPGFVKSFP GVTVLALDKL IANIEAVFAQ IIGAIQLLLG FLLAAGMAVV
VATLLASLDA RQQEAVLLRT LGAERAYLAK ALWSEFIVLG VLAGLLASAC AEAAMALIGD
RLFELPPRLH PWLWLVLPAA GALLVGASGW LTTRHITRLP PMQSIRELA
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