| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0665 |
|---|
| Symbol | |
|---|
| ID | 3672630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 705427 |
|---|
| End bp | 706506 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637709337 |
|---|
| Product | transaldolase |
|---|
| Protein accession | YP_314423 |
|---|
| Protein GI | 74316683 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00876] transaldolase, mycobacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.117486 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA CGAAAGACGT TTCCAGACTC GGTCAGAGCC TGTGGCTCGA CAACCTGTCA
CGCGACCTGC TGCGCGACGG CGCGCTCGCG AAAATGATCG CCGAGGACGG CGTGTCGGGG
GTGACGTCGA ATCCCTCGAT CTTCCAGAAC GCGCTGGCCA CCAGTCCCCA CTACGCCGAT
GACCTTGCAC GCCTGAGGCG CGAGGAGGCG GACGTCGAAC GGCGCTACGA GGCGCTCGTC
ATCCCTGACA TCCGCGACGC GTGCGACCTG CTGTTGCCGC TGTTCGAGCG CAGCGCCGGC
AATGACGGCT ACGTGAGCCT CGAAGTCGCG CCGCGCCTGG CGTACGACAC ATCAGGCACG
GTCGACGAGG CGCGTCGCCT GTGGTCGCTC GTGGACCGTC CCAACCTGCT GGTCAAGGTA
CCCGGCACGC CCGAAGGCGT CGACGCCTTC GAGACGCTGA CCCAGCTCGG CATCAACGTC
AACGTGACGC TGCTGTTTTC TATAGCTCAG GCGCAGGCCG TGTTCGATGC CTACGTCCGC
GGCCTCGGCA AGCGCGCTGC ATCAGGCGCC GACCTGCGCC GCGCCAAGGC TGTCGCAAGC
CTGTTCCTGT CGCGTGTCGA CACTGCGGTC GACGCCGAAC TTGCGGGGAT CGGCACGCAG
GAATCGCTGT CGCTGCGCGG CAAGGCCGCG GTGGCGATGG CGAAGCTCGC CTACCAGGCC
TACCTCGAAA CCTTCCGCGG CCCCGCGTTC ACCGCCCTCG CCGCGAGGGG CGCGCGCCCG
CAATTCCTGC TATGGGCCAG CACCGGGGTC AAGAACCCGG ATTACCACGA CCTGCTTTAC
GTCGAGCCGC TGATCGGCCG GGAAACGATC AACACGCTGC CCGACAAGAC GCTCGCCGCG
CTACGCGACC ACGGCCAGCC CGTTCCCCAG CTCGAGCAGG CGGTCGACGA GGCGAGCGCC
CAACTCGCCG AGTTCGCGCG CCTCGGCGTC GACCTCGATG CGGTCGCGGC GCGCCTGCAG
GACGCGGGGG TGAAGCAGTT CGAAACCTCT TACCAGGCGC TGCTCGCCCA GATCGGCTAG
|
|---|
| Protein sequence | MNITKDVSRL GQSLWLDNLS RDLLRDGALA KMIAEDGVSG VTSNPSIFQN ALATSPHYAD
DLARLRREEA DVERRYEALV IPDIRDACDL LLPLFERSAG NDGYVSLEVA PRLAYDTSGT
VDEARRLWSL VDRPNLLVKV PGTPEGVDAF ETLTQLGINV NVTLLFSIAQ AQAVFDAYVR
GLGKRAASGA DLRRAKAVAS LFLSRVDTAV DAELAGIGTQ ESLSLRGKAA VAMAKLAYQA
YLETFRGPAF TALAARGARP QFLLWASTGV KNPDYHDLLY VEPLIGRETI NTLPDKTLAA
LRDHGQPVPQ LEQAVDEASA QLAEFARLGV DLDAVAARLQ DAGVKQFETS YQALLAQIG
|
|---|
| |