Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0662 |
Symbol | |
ID | 3672627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 702339 |
End bp | 704000 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637709334 |
Product | acetolactate synthase, large subunit |
Protein accession | YP_314420 |
Protein GI | 74316680 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0231424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATTT CCGTCAGCGA ACTGATCGTC CGTTACCTCG AACGCCTCGG CATCGGTCAC GTCTTCGGCA TGCCCGGTGC GCACATCCTG CCGATCTACG ACCGCCTGCG CGACGCCTCG CTGCGCACCG TGCTCGTCAA GCACGAGCAG GGTGCGGCCT TCATGGCCGG CGGCGAGGCG CGGGTCGCGC GCCGCCCCTC GGCCTGCATC GCGACCTCCG GACCCGGCGC GACCAATCTC ATCACCGGCA TCGCCAACGC CTACGCCGAG CGGCTGCCCG TGCTCGCGAT CACCGGCGAG ACGTCGACCT ACATCTTCGG CCGCGGCGGC CTGCAGGAAA GCTCGGGAGA AGGCGGCGCG ATCGATCAGG GCGCGCTCTT CGCGAGCATC ACGCGCTACC ACAAGCGCAT CGAGCGCACC GACTATCTCG GCCAGGCGCT CAACCAGGCG ACCCAGGCCC TGCTCGGCCG CGAGCCCGGA CCGGTGCTGT TGTCGATCCC CTACAACGTG CAGAAGGAAT CGGTCGACGC CGGCGCGCTC GAGCAGGTTC ACTTCCCGCG CGCCGAAGTC ACGCGCCACA CCGCCGCGGT GAGCGAACTC GCCGCGCTCA TCGCCGACGC CCGGGCGCCC GTCATCGTCG CGGGATACGG CTGCATCGCC GCCGGCGCGC GCGAACTCGT CGGCACGCTG TCGGAAAAAT TCCGCATCCC GGTGACGAGC AGTCTCAAGG CCAAGGGCGT CGTCACCGAA GGTTCCGACC TGTCGCTCGG CTGCCTCGGC GTGACGTCCA ACGGCGACGC CTACCGCTAC CTCGCCGAGC ACGCCGACCT GCTCGTCTTT CTGGGCGCGA GCTTCAACGA ACGCACGAGC TATCTGTGGG ACGCGGAACT CCTGGCCCGC AAGAAGATCG CCCAGGTCGA CCGCGACCCC GCGCAGCTCG GACGCGTCTT CCAGCCCGAT GTCGCGGTGT GCGGCGATAT CCGTGCCGTC GTCGAAGACC TGCTCGCCGC ACTCGCAACG AGCGGCGCCG CGCCGAAGAA GACCGAACGT CTCGCGCGTC ATCGGGCCGG ACTCAAGCGA CCGACGCAGG AGGCCGCGCC CGAGAACGAA GGGTTTCAGC TGATCCGCCA CTTCTTCCAC CTGCTCGCGA AGCGGTTTCC ACGCGAAGCG CTCGTGTTCG ACGACAACAT CGTCTTCGCC CAGAGCTACT TCGACGTGTC GGACCGCAAC CGCTATTTCC CCAACACCGG CATCTCGTCG CTCGGTCACG CGCTGCCTGC CGCAATCGGG GCGCGCTGCC ACGCCAAGGA CAGCCCGGCC TTCGCGATCC TCGGCGACGG CGGCTTTCAG ATGTGCTGCA TGGAAATGAT GACGGCGGTG AACTACGGCA TCCCGCTCAA CGTCGTCGTG ATCAACAACG GCACGCTCTC GCTGATCCGC AAGAACCAGT TCCAGCTCTA CGGTGAGCGC TACATCGACT GCGATTTCAC CAATCCCGAC TTCGCCCTGC TCGCCCGCTC CTTCGGCGTC GCGCACTATC GCGTCGCCAA CGAAGCCGAA CTCGACGCCG TCTTCGCCGA CGCCGACCTC ATCGGCGGGA TCAACCTCAT CGAAATCCTG CTCGACAAGA ACGCCTTCCC GCGCTACCTG GCAGGCCGGT AG
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Protein sequence | MNISVSELIV RYLERLGIGH VFGMPGAHIL PIYDRLRDAS LRTVLVKHEQ GAAFMAGGEA RVARRPSACI ATSGPGATNL ITGIANAYAE RLPVLAITGE TSTYIFGRGG LQESSGEGGA IDQGALFASI TRYHKRIERT DYLGQALNQA TQALLGREPG PVLLSIPYNV QKESVDAGAL EQVHFPRAEV TRHTAAVSEL AALIADARAP VIVAGYGCIA AGARELVGTL SEKFRIPVTS SLKAKGVVTE GSDLSLGCLG VTSNGDAYRY LAEHADLLVF LGASFNERTS YLWDAELLAR KKIAQVDRDP AQLGRVFQPD VAVCGDIRAV VEDLLAALAT SGAAPKKTER LARHRAGLKR PTQEAAPENE GFQLIRHFFH LLAKRFPREA LVFDDNIVFA QSYFDVSDRN RYFPNTGISS LGHALPAAIG ARCHAKDSPA FAILGDGGFQ MCCMEMMTAV NYGIPLNVVV INNGTLSLIR KNQFQLYGER YIDCDFTNPD FALLARSFGV AHYRVANEAE LDAVFADADL IGGINLIEIL LDKNAFPRYL AGR
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