Gene Tbd_0655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0655 
Symbol 
ID3672620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp695706 
End bp696707 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content63% 
IMG OID637709327 
Productdehydrogenase complex, E1 component, alpha subunit 
Protein accessionYP_314413 
Protein GI74316673 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID[TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTG AAGACAAGAA ACGTGTGCTG CGCGAAATGG TGTTGCACCG CCGTTTTGAA 
GAGCGCTGTT ATCAGGCTTA TATCGAACGC AAGATCGGCG GTTTCCTGCA CCTCTACCCG
GGTCAGGAAG CGTGCTGCAA CGGCGTCATG GAAGCCGCGC GCCCCGGGCA CGACTACGTG
ATCACCGGCT ACCGCGATCA CGTGCACGCG ATCAAGTGCG GCGCCGATCC GAAGGAAGTC
ATGGCCGAGC TGTACGGCAA GGAAACCGGC TCATCCAAGG GCCGCGGCGG CTCGATGCAC
ATCTTCGACG CGGGCAAGCG TTTCATGGGC GGCTACGCGC TGGTCGGCGG TCCCTTCCCG
CTCGCCGCCG GCATCGCCAA GGCGATCCAG CTGAAGGGCG GCGACGAGAT CGCGATCTGC
TTCCTCGGTG ACGCGGCCAA CAACCAGGGC ACCTTCCACG AGACCATGAA CATGGCCGCG
CTGTGGAAGC TGCCGGTGCT GTTCGTCTGC GAGAACAACC TCTACGGCAT CGGCACCTCG
ATCGAGCGCT CGACCGCCGT CGTGCACCAG CACAAGCGCG TCGCGGCCTA CAACATTCCC
GCCGACGAAT GCGACGGCCA GGACATCGAG GTCGTCTACG AGCACGCACG CAAGGCCGTC
GATCACGTGC GCGCGGGCAA CGGCCCGTTC TTCCTCGAAC TGATGACCTA CCGCTATCGC
GGCCACTCGA TGTCCGACTC ACGCGGCTAT CGCACGCGCG AGGAAGAAGA ACTGTGGAAG
CAGCGCGACC CGATCTTCAT CCTGCGCGAC CGCCTGATCA AGGAAGGCGC GACGACGATG
GCCGAATTCG AGGCGCTCGA GAAGGAAACC GACGCCTACA TCGAGAACGA GGTCATCAAG
TTCGCCGAAG CCTCGCCCGA GCCGAGCGTC GACGAACTCG AGAAATACGT ACTCGCCGAT
CGCGAGAGCC AGCTGCCCTG GCTCACCGGC AAGGCCGCCT GA
 
Protein sequence
MKIEDKKRVL REMVLHRRFE ERCYQAYIER KIGGFLHLYP GQEACCNGVM EAARPGHDYV 
ITGYRDHVHA IKCGADPKEV MAELYGKETG SSKGRGGSMH IFDAGKRFMG GYALVGGPFP
LAAGIAKAIQ LKGGDEIAIC FLGDAANNQG TFHETMNMAA LWKLPVLFVC ENNLYGIGTS
IERSTAVVHQ HKRVAAYNIP ADECDGQDIE VVYEHARKAV DHVRAGNGPF FLELMTYRYR
GHSMSDSRGY RTREEEELWK QRDPIFILRD RLIKEGATTM AEFEALEKET DAYIENEVIK
FAEASPEPSV DELEKYVLAD RESQLPWLTG KAA