Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0643 |
Symbol | |
ID | 3672608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 681042 |
End bp | 682463 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637709315 |
Product | cytochrome c oxidase cbb3-type, subunit I |
Protein accession | YP_314401 |
Protein GI | 74316661 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000439174 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.556458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCGG CAACCTACAA CTACAAAGTG GTCCGCCAGT TCGCCATCAT GACGGTGGTG TGGGGGATCG TCGGCATGTT GGTGGGGGTG ATCATCGCCT CGCAACTGAT CTGGCCCGAC CTGACGTTCG GCATCGAATG GCTTTCCTAC GGGCGTCTGC GGCCGCTGCA TACGAACGCG GTGATCTTCG CCTTCGGCGG CTCGGCGATG TTCGCCGTGT CCTACTACAT CGTCCAGCGC ACCTGCCAGG TGCGACTTTG GGCCGAGAAG CTCGCGGCCT TCACGTTCTG GGGCTGGATG GCGGTGATCG TGCTGGCGGC GATCTCGCTG CCGATGGGCT ACACGAGTTC GAAGGAATAC GCCGAGCTCG AGTGGCCGAT CGATCTCCTG ATCGCCGCCG TCTGGGTGTC CTACGCGCTG GTGTTCTTCG GCACCATCGT CAAGCGCAAG ACGAAACATA TCTACGTCTC GAACTGGTTC TTCGGCGCCT ACATTCTCGT GATCGCGCTG CTGCACATCG TCAACAGCGC CGAGCTGCCG GTGACCTTGA CCAAGTCCTA CTCGGCCTAC GCCGGCGTAC AGGACGCGAT GGTGCAGTGG TGGTACGGGC ACAACGCGGT CGGCTTCTTC TTGACCACCG CCTTCCTCGG CATGATGTAC TACTTCATTC CGAAGCAGGC CGGGCGGCCG ATCTACTCGT ATCGGCTTTC AGTGGTTCAC TTCTGGTCGC TCAACTTCAT CTACATGTGG GCCGGCCCGC ACCATCTGCA ATACACAGCG CTGCCCGACT GGGCGCAGTC GCTCGGCATG GTGTTTTCGC TGATGCTGCT CGCGCCGTCG TGGGGCGGCA TGATGAACGG GATCATGACG CTGTCGGGCG CATGGCACAA ACTGCGCACC GACCCGATCC TCAAGTTCAT GGTCACTGCG CTGTCGTTCT ACGGCATGTC GACCTTCGAA GGGCCGATGA TGTCGATCAA GACCGTCAAC GCGCTCTCGC ACTACACCGA ATGGACCGTC GGCCACGTGC ACTCGGGCGC GCTCGGCTGG GTCGCGATGA TCACGATCGG CTCGATGTAC TACCTGATCC CGCGGCTCTT CGGCCGTGAT TCGATGGCGA GCATACGGCT GATCGAGTGG CACTTCTGGC TGTCGACGAT CGGCGTCGTG CTCTACATCG CGTCGATGTG GATCGCCGGT GTCGCGCAGG GCCTGATGTG GCGCGCGGCG AACGCCGACG GCACGCTGGC GTACAGCTTC GCCCAGGTCG TCAACACGAT GTATCCCTTC TACGGCATCC GTCTGCTCGG CGGCGCGATG TTCCTCTCGG GCATGCTGAT GATGGCGTAC AACGTCTGGC AGACCGTCCG CGTCGGCCGC GTCGTCAACG ACGCCCCGAT CCCGCAAGCC GTCCACGCCT AA
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Protein sequence | MEAATYNYKV VRQFAIMTVV WGIVGMLVGV IIASQLIWPD LTFGIEWLSY GRLRPLHTNA VIFAFGGSAM FAVSYYIVQR TCQVRLWAEK LAAFTFWGWM AVIVLAAISL PMGYTSSKEY AELEWPIDLL IAAVWVSYAL VFFGTIVKRK TKHIYVSNWF FGAYILVIAL LHIVNSAELP VTLTKSYSAY AGVQDAMVQW WYGHNAVGFF LTTAFLGMMY YFIPKQAGRP IYSYRLSVVH FWSLNFIYMW AGPHHLQYTA LPDWAQSLGM VFSLMLLAPS WGGMMNGIMT LSGAWHKLRT DPILKFMVTA LSFYGMSTFE GPMMSIKTVN ALSHYTEWTV GHVHSGALGW VAMITIGSMY YLIPRLFGRD SMASIRLIEW HFWLSTIGVV LYIASMWIAG VAQGLMWRAA NADGTLAYSF AQVVNTMYPF YGIRLLGGAM FLSGMLMMAY NVWQTVRVGR VVNDAPIPQA VHA
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