Gene Tbd_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0639 
Symbol 
ID3672604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp677800 
End bp679251 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content65% 
IMG OID637709311 
Productiron-sulfur 4Fe-4S ferredoxin transmembrane protein 
Protein accessionYP_314397 
Protein GI74316657 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000519422 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.856742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTCAC GCGGCTCAGA ACCCGACACT GGAACCCCAT TGACCGACGA CAAGCAGACG 
GCCCCCGAGG CCCCGATCGA GCAGCAGCTC TACGCGATCC GGCAAAAAAT CCAGCCGCGC
GCCGTGCACG GCGTGTTCGC CAACTGGCGC ATCGCGCTCG TGCTGCTGAC CCAGGCGGTG
TACTACGGCC TGCCCTGGCT GCGCTGGGAC GATCGGCAGG CCGTGCTGTT CGATCTTGCC
GCGCGCAAGT TCTACATCTT CGGCCTCGTG TTCTGGCCGC AGGATTTCGT TTATCTGACG
GCCATCCTGA TCCTCTCCGC GCTCGCGCTG TTTCTGTTCA CCGCGGTCGC GGGACGGCTG
TGGTGCGGCT ACGCCTGCCC GCAAACCGTC TACACCGAAA TCTTCATGTG GGTCGAGAAC
TGGCTCGAGG GCGACCACGT CGCGCGCCGC AAGCTCGACA AGTCGCCGTG GAACGCGACC
AAGCTCAGAA AACGCGGCCT CAAGCACGTC GTCTGGATCG CGATCGCGCT GTGGACCGGT
TTCACCTTCG TCGGCTATTT CACGCCGATC CAGACGCTCG CCACCGAGGT CCTGAACGCT
GCACTGACGC CCTGGCAAAC CTTCTGGATC CTGTTCTACG CCTTCGCCAC CTGGGGCAAT
GCCGGCTTCA TGCGCGAACA GGTGTGCAAG TACATGTGTC CCTACGCGCG CTTCCAGAGC
GTGATGTTCG ATTCCGACAC GCTGACCGTG ACCTACGACA ACTCGATCGG CGAGCCGCGC
GGACCGCGCA GCAGGAAGAC CGATTACAAG GCGGCCGGGC TCGGCACCTG CGTCGACTGC
GGCGTCTGCG TCCAGGTCTG CCCGACCGGC ATCGACATCC GCAACGGCCT GCAGTACGAA
TGCATCGGCT GTGCGGCGTG CATCGACGGT TGCGACCAGA TCATGGACAA GATGGGCTAC
CCGCGCGGGC TGATCCGCTA CACGACGGAA AACGTCGTCA AGGGTAAATA CCCCGACGCC
GGCATCCTTC GCCACGTGCT GCGCCCGCGC ACGGTCATCT ACAGCGTGCT GCTGTTGGCG
AGCGCCGGGG CCTTCGTCTT CAGCCTCGCG ACCCGGGTGC CGCTGCGCGT CGACGTCGTG
CGCGACCGCG TCGCGCTGTC GAAGGAAACC GACGAGGGAC TGATCGAGAA CGTCTATCGC
CTGCAGATCA TCAACAAGGA CGGCGCGCCG CACCGCTACA CGATCGGCGC GACGGGCATC
AAAGGCCTCG AGGTCGCGAC GGCGACCCGC CAGATCGTGG CCGCGCCGCT GCAGACGATC
GACGTGCCGG TCAGCCTGAT CGCCGACCCG ACCGAATTGC AAGGCCGCTC GATCGAGGTC
AGCTTCGTCG TCCAGGCGAC CGACGACCCC CGCATCAGGG CCGCAGTCGA GACCAAATTC
TTCAACCGGT GA
 
Protein sequence
MRSRGSEPDT GTPLTDDKQT APEAPIEQQL YAIRQKIQPR AVHGVFANWR IALVLLTQAV 
YYGLPWLRWD DRQAVLFDLA ARKFYIFGLV FWPQDFVYLT AILILSALAL FLFTAVAGRL
WCGYACPQTV YTEIFMWVEN WLEGDHVARR KLDKSPWNAT KLRKRGLKHV VWIAIALWTG
FTFVGYFTPI QTLATEVLNA ALTPWQTFWI LFYAFATWGN AGFMREQVCK YMCPYARFQS
VMFDSDTLTV TYDNSIGEPR GPRSRKTDYK AAGLGTCVDC GVCVQVCPTG IDIRNGLQYE
CIGCAACIDG CDQIMDKMGY PRGLIRYTTE NVVKGKYPDA GILRHVLRPR TVIYSVLLLA
SAGAFVFSLA TRVPLRVDVV RDRVALSKET DEGLIENVYR LQIINKDGAP HRYTIGATGI
KGLEVATATR QIVAAPLQTI DVPVSLIADP TELQGRSIEV SFVVQATDDP RIRAAVETKF
FNR