| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0625 |
|---|
| Symbol | |
|---|
| ID | 3672590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 658040 |
|---|
| End bp | 658909 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637709297 |
|---|
| Product | UDP-glucose pyrophosphorylase |
|---|
| Protein accession | YP_314383 |
|---|
| Protein GI | 74316643 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1210] UDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01099] UTP-glucose-1-phosphate uridylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0556323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.764647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAG TCAGAAAAGC AGTATTTCCG GTTGCCGGCC TCGGCACCCG TTTTTTGCCG
GCGACCAAGG CCAGCCCCAA GGAGATGCTC CCGATCGTCG ACAAGCCGCT GATCCAGTAC
GCAGTCGAGG AGGCGATGGA CGCGGGTATC ACCGACATCA TCTTCGTCAG CAGCCGCACC
AAGCGCACGG TCGAGGACCA TTTCGACAAG GCCTACGAAC TCGAAACCGA ACTCGCTGCG
CGCGGCAAGA ACCGTGATCT CGAACTCGTG CAGTCGATCC GCCCGGCCGG GGTCAATTTC
ATCTACATCC GCCAGGCCGA GGCGCTCGGG CTCGGCCATG CCGTGCTCTG CGCGCGCCCC
GTCGTCGGCG AGGAACCCTT CGCGGTGATC CTGGCCGACG ACCTGCTCGA CGGCGCGACG
TCGGTCATGA AGCAGATGGT CGACCAGTAC AGCTATTACC AGTGCTCGGT CCTCGGCGTA
CAGCAGGTCG CGCCGGAAGA CACGGCATCC TACGGCATCG TCGACGCGAC TCCGCTCGCC
GATCGGGTGT CGCGCGTCAA CGCGATCGTC GAAAAACCCA AGCCCGAAGA AGCGCCGTCG
ACCCTCGGCG TCGTGGGTCG CTACATCCTG ACGCCGCGCA TCTTCGACCA CATCCAGCAG
ATCACGCCGG GCGCGGGCGG CGAACTGCAG CTGACCGACG CGATCGCCGG GCTGCTGAAG
GAGCAGCAGG TTCTCGCTTA CGCCTACGAC GGCGTGCGCT ACGACTGCGG AAGCAAGCTC
GGCTACCTGC AGGCGACCGT CGAATACGCC CTGAAGCACA AGGAAGTCGC AGCCGACTTC
GAGGCCTACC TCAAGACGCG GATGTGCTGA
|
|---|
| Protein sequence | MQQVRKAVFP VAGLGTRFLP ATKASPKEML PIVDKPLIQY AVEEAMDAGI TDIIFVSSRT
KRTVEDHFDK AYELETELAA RGKNRDLELV QSIRPAGVNF IYIRQAEALG LGHAVLCARP
VVGEEPFAVI LADDLLDGAT SVMKQMVDQY SYYQCSVLGV QQVAPEDTAS YGIVDATPLA
DRVSRVNAIV EKPKPEEAPS TLGVVGRYIL TPRIFDHIQQ ITPGAGGELQ LTDAIAGLLK
EQQVLAYAYD GVRYDCGSKL GYLQATVEYA LKHKEVAADF EAYLKTRMC
|
|---|
| |